GENSCAN 1.0	Date run: 16-Jan-104	Time: 01:51:13

Sequence PSMF1_1 : 56432 bp : 43.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1269   1314   46  2  1   91   97    47 0.447   3.88
tggtttccagggaggcagggagcttggaatacccacattgctgtcacttggcaaccagga
actggtggctgcagccaccagccaagttctttccatcatcctgggccctcacctctggca
taggctcttggtagtgggggcccagacagggaggcacctgccacctgcttcccttctcag
CCACCCACAGCCCTCATAGGGCAGAATGGGACTCTTGCTGATGTAG
gtaagtccacagaaagtgctggatggatcaggggcaacacacacacacacacacacacac
acacacacacacacacacacacaccagccccaggagttcctcccatttgttcccatccct
ggaggaccctggggttcaggacaggtggaacatagtcctggccttcaggggattcacagc

 1.02 Intr +   4326   4450  125  1  2   53   94    -5 0.327  -3.10
gggcattacaaacagaagggacagagcaagcaaaagcagggaagactgaaagtgcagaac
ttctcagtagaaagggcaaatagctttatgccacaggcagtacatctcagagaggagttc
cacagccactagctttagtgtcatccagaatgtagtcaacatacatgcactcttcctcag
ACCTTCTCATCCAGAATCTCTGCAGAAGGGGTTCAAGAATCTGGTTGTCTCAAGGAAACT
TTAGGAACACAAAATTTGGAGAGGCACAGGGCCAGCTGACAAAGGGAGTGATGGACTATA
AAGAG
gtaagagtgccctgactgggttggggctaggccaagaattcattccttcattcagtattc
attctgtctttcaataagtatagattgatcccagaaggcactcaggtacatatgtgcaca
aggtagacatgctccctgttcctttgtcacagtctagtggaaagacagtcattaaataag

 1.03 Intr +   6658   6807  150  0  0  114  101   134 0.947  17.66
cagttgcgcccgctgttgggactacttccggcttccccgccccgccccgtccccgggcgt
ctccattttggtctcaggtgtggactcggcaagaaccagcgcaagagggaagcagagtta
tagctaccccggccgcggagccggctcactgcactacccccgcccccttctttcctccag
ACGCCGAAGTCGCGGGCGCTCATGGCGGGCCTGGAGGTACTGTTCGCATCGGCAGCGCCG
GCCATCACCTGCAGGCAGGACGCGCTCGTCTGCTTCTTGCATTGGGAAGTGGTGACACAC
GGTTACTTCGGCTTGGGTGTCGGTGACCAG
gtacgccacggagccggccagggtggaggagggaactgtcttctgcccaaactcagagta
ccggaggcctggtccagagcgcccgatttccccgcttctcccagtgcagggtctggggca
gatggcagcgttggtaaaacctgcgggtcggaggttgctcacctgccccatcccagccca

 1.04 Intr +  13403  13555  153  1  0   73  105   232 0.998  23.67
cccagagacctgggccctagacctctctctcgctgtaggatcttgggcaagtcatttctc
ttgacctccacatcttcatctgtgaagtgaggtgggtaagattagcttatctcgtgaggt
tctttatagttctgtgttttgagttcatgatctttctcctctcaactgtggtcttcccag
CCGGGTCCCAATGATAAGAAGTCAGAACTGCTGCCAGCTGGGTGGAACAACAATAAAGAC
CTGTATGTCCTCCGGTATGAGTATAAGGATGGGTCCAGAAAGCTCCTTGTGAAAGCCATC
ACCGTGGAGAGCAGCATGATCCTCAATGTGCTG
gtgagtctctgggacacgtgagtctgctgatgagatggggataggaatggctgttttgaa
acccatttaacggtacgaatccagagcttcaatgttcatgtagcccttacctagtgatcc
cacttctggaactttatcttaaggtgagaaccctaagtatagaaaaccttcgtgcacaaa

 1.05 Intr +  15331  15413   83  0  2   85   80    99 0.453   7.24
tcctaaatcagagaagtctccaagccttaggaaggtatttcatataaacagtccttatat
atgtctctgtggacatatgtgaatatttctttaggttgaagactttgttactctcccttc
accctcccactcttagccagaaatatcccagtctctcactttctattttcacccatctag
GAATATGGCTCACAGCAAGTGGCAGACTTGACCCTGAACTTGGATGATTATATCGATGCA
GAACACCTGGGTGACTTCCACAG
gtacttctaaatgatgtctcttccctgggaaaaagaagagagaactaatggcaagatatg
aggaatagggtggatgtgtccagaaaattaaggaaggtgaatggaagaaccttttatttc
tgggcacaacttcctaattttcttttctgttttttatgtatttgaagaggagacttccat

 1.06 Intr +  23026  23211  186  1  0  101  105   153 0.490  17.10
tggggctgttgcccccctcacccaggtccagcaggcggcctgttcccccacttataaaca
ggccaagcgcaatgccaggagctatcagggccgccgccgccgccgtcgttgcagccagaa
taccacttccagggttcctagccaactgcaagcagttgactcttcatctgcttcctgcag
GACCTACAAGAACAGTGAGGAGCTTCGGTCTCGTATTGTGTCTGGAATCATCACACCTAT
CCATGAGCAGTGGGAAAAGGCTAATGTAAGCAGTCCCCACCGGGAGTTCCCCCCTGCTAC
CGCCAGAGAGGTGGACCCACTCCGGATTCCTCCACACCACCCACACACCAGTCGGCAGCC
TCCCTG
gtgagtacagagtgcctagcgggaagcccatgcttctgtagagggattccagccagctat
ccccatcctgccacttgaccccatccctggcccgtatgtgttttcaacaaaatgatcagt
gtcttggggtgcatggagttagaaagtggagacgtaagtggagcagtgagttcttgaact

 1.07 Term +  35010  35097   88  0  1  -49   55   211 0.011   1.23
caggtagctggcaaagatgagaacaaatgtgaaggtgtaatgagtagagggtctctcaag
agagaaccttgttttattttttttaaatacctaccatcttccccccaaaacagatttgat
ggaggattaggtgtgagagtgtcagcccagagcgggtgttgggcaagtatttaggcccag
GCCCAGGTCCATTATGGACATTGTTTCCGTTATCATCATCATCATCATCATCATCATCAT
CATCATCATCATCACCACCCTGTGTTGA
ggacagaagtaatttccctttcttggctgttcaccatgcgttggcctgtgaaccgagtgt
gttaatttatggttgcttatcttctggacagccctacaagaagatcagtggcatccccac
tttacaggggaagagacagtggctgagggaggtaacgtagcttctcagcgttatctcgct

 2.01 Init +  48490  48793  304  0  1   71   13   320 0.833  20.24
ccttgattaatgtctttgtgagtatattttaatttaaattctttatttaaaatgaatacc
tagacataaaattatcagatcaaagaatagagagatatataagagggtctcactcactac
tgctggcctgtgctccatgtcttcccaccgctctgccgcccagctcctccaccgatcaca
ATGGAAGAAGAGATCACCATACTCGTCATTGACAATGGCTCCAGCATGTGCAAAGCTGGT
TTTGCTGGGGACGACGCCCCTGGAACCATGTTTCCCTCCACTGTCAGGTGCCCCCAACAC
CAGGGCATGATGGTGGGGATGGGCCAGAAGGTCTTCTACCTGGGCGACAAGGCCCAGAGC
AAGCACGGCATCCTGACGATGAAGTACCCCATCGAGCACAGGATTTTCACCAGCTGGGAA
GGCATGGAGAAGATCTGGCACCACACCCTACAACAAGCTGCATGTGTTCCTGGAGGAGCA
CCTG
gtgctgctgactgagggccccctgaaccccaaggccaacagaaagaagatggctcagatc
atgtttgagaccttcaataccctggacatgtacgtggcagtccaggccatacttctatgc
ctctgggcgcaccactggcattgtcatggattctggagacggagtcacacacacggtgcc

 2.02 Intr +  49031  49490  460  0  1   17   -6   547 0.382  30.44
atcatgtttgagaccttcaataccctggacatgtacgtggcagtccaggccatacttcta
tgcctctgggcgcaccactggcattgtcatggattctggagacggagtcacacacacggt
gcccatctacaagggctatgccctccccacgccatcctgcgtctggacctggctggccag
GACCTGACCACCTCATGAAGATTCTCACAGAGTACGACTACAGCTTCCCTACCACAGCCA
AGCGGGAGATCATGCGTGACATCAAGGAGAAGCAGTGCTGCGTCGCCCCGGACTTTGAGC
AGGAGATGGCCACCGCTATGTCATCCTTCTCCCTGGAGAAAAGCTACAAACTGCCTGACA
GCCAGGTGATCACCATTGGCAACATGCAGTTCCAGTGTTTGGAGGTGTTGTTCCAGCCCT
TCTTTCTGGGTGTGGAATTTTGCAGCATCCATGAGACCACCTTCAGCTCTATCATAAGGT
GTGATGTGGGCATCCACAAGGACCTGTATGCCAACACGGTGCTGGCCAGTGGCACCACCA
TGTACCCAAGCATCTCCAACAGGATGCAGAAAGAGATCACTGCCCTGGTGCCAGCACAAG
GAAGATCAAGATCATCGTGCTCCCAGAGCGCAAGTACTCC
gtgtggatcagcagctccatcctggcctcattgtccaccttccagcagatgtggattagc
aagcaggagtatgacaagtcgggcccctccatgtccaccacaaatgcttctaaatggact
acaagcagatgtgtagcatttgctgcataggataattcacacgtataaatttgcccctga

 2.03 Intr +  51036  51089   54  0  0  110   92     7 0.511   1.39
tacataattgtcattgtaggattatcattgttcatctgagccaaggaccaccctgaaata
tcccttgtgctatggtctcatgcaagggtttcccatgcctgtgagtgtgtttgtgatccc
acatgtatcaggtgcctggctgctctgggacttgcagtaattgtctcttgtttgtttcag
GTGTGATCCCCTGGGCCCGTTTGTTGTCGGGGGAGAAGACTTAGACCCTTTTGG
gtgagtactgctggggaggtggcagcaacacaacttgcttttgtggcttttcagccccag
ctcatcttctaattttagagttttcggtcagtctcttcctttggggtggaggaggcagtt
gttgctgagcagctgagaaagcactgccacatacgctgcccctccacacctagagcggtg

 2.04 Intr +  52224  52382  159  0  0  110   87    67 0.689   7.90
aggctttgtgttcttgcccttgcccactttccgctggctctcaggcagccatccacatgt
ctgcttgggccatccagagtagacatcccagccattcttggtgcattgtaacctccctcg
ccttttctccaagggcagtccttgccacacctgcttacctaacttttcttcttgcctcag
GCCTCGGAGAGGTGGCATGATTGTGGATCCCCTGAGATCTGGCTTCCCAAGAGCACTTAT
TGACCCTTCCTCAGGCCTCCCGAACCGACTTCCTCCAGGCGCTGTGCCCCCAGGAGCTCG
CTTTGACCCCTTTGGACCCATTGGGACCAGCCCACCCGG
gtacgtagtcactcaggtatgctgagaagtaggacctgatggcagcttggttcagtgtgg
cagcaatgaaggtttctagccccaggcacagagctgccgctgccttcacctgttgctgcc
aggagagtggagcctcctccagggccctgcctgatttctccctggagccttctaggagct

 2.05 Term +  52935  52986   52  0  1  108   49    70 0.766   2.00
taccaagcgggggagtcaggattcaaaccccggttgtctggctcttgagtgcatgtgttt
aaattcctcacaccgccacatcatgttgaagggcaggctccctcagtgcagggtcatgtc
tgcccatgttcccctggtctctccatcactccaactcatcagcccctctttccattccag
ACCTAACCCAGACCATCTCCCCCCGCCGGGCTACGATGACATGTACCTGTGA
aggcctcaagaatgtaacatcccaggcttccctccattctcctggagctgccaccgctgt
ccccatcagcaaccatgttcttgcaggctgggggcaagggattctgctcatgtgtttgca
gaccggctgggatagcctccccaccccttatcagagccaagacacctgctgcagctctcc

Predicted peptide sequence(s):


>PSMF1_1|GENSCAN_predicted_peptide_1|276_aa
PPTALIGQNGTLADVDLLIQNLCRRGSRIWLSQGNFRNTKFGEAQGQLTKGVMDYKETPK
SRALMAGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYFGLGVGDQPGPNDKKSELLPA
GWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEYGSQQVADLTLNLDDYIDAEH
LGDFHRTYKNSEELRSRIVSGIITPIHEQWEKANVSSPHREFPPATAREVDPLRIPPHHP
HTSRQPPWPRSIMDIVSVIIIIIIIIIIIIIITTLC

>PSMF1_1|GENSCAN_predicted_peptide_2|342_aa
MEEEITILVIDNGSSMCKAGFAGDDAPGTMFPSTVRCPQHQGMMVGMGQKVFYLGDKAQS
KHGILTMKYPIEHRIFTSWEGMEKIWHHTLQQAACVPGGAPGPDHLMKILTEYDYSFPTT
AKREIMRDIKEKQCCVAPDFEQEMATAMSSFSLEKSYKLPDSQVITIGNMQFQCLEVLFQ
PFFLGVEFCSIHETTFSSIIRCDVGIHKDLYANTVLASGTTMYPSISNRMQKEITALVPA
QGRSRSSCSQSASTPCDPLGPFVVGGEDLDPFGPRRGGMIVDPLRSGFPRALIDPSSGLP
NRLPPGAVPPGARFDPFGPIGTSPPGPNPDHLPPPGYDDMYL