--------------------------------------------------------------------------------
GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (15789 bp)
--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       7850       8043   1   Terminal    194    78        Good
taaaatcagtaattaatttatggttataccttagtaaggtggtaaaagcttcacagatga
gtctgatgctcagggcacgttaattatgtttaatacttggtggcagtgatacatctctta
atttttaatatctggatgcatattttggagtattaaatatatatgctcctatctttacag
GAATCCTACGGCCCCTGAATATTTTGGCATCTTCAACCTACCGCAACTGTGTCAAGAATG
CCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTGTTT
CCTCCACTCCCAGACTTACCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGTGA
TCCTTAATAGGTAG
agtatatttctttgtggggttttttttgttttttgttttttgtttttttttgagacggag
tctcactctgttgcccaggccagagtgcagtggtgcattctcagctcactgcaacctcca
cctccggggttcaagcaattctcctgcctcagcctcctaagtagctggaaagttctggga

Exon  2 +       8315       8461   2   Internal    147    10        Poor
ggtgcattctcagctcactgcaacctccacctccggggttcaagcaattctcctgcctca
gcctcctaagtagctggaaagttctgggattacaggcgtgagccactgtgcctggctggt
agagtctatttcaataaacatgatgcttagacaaactttccaagatattcatgcctgcag
GGGTATCCTAGAAGTAGGTGGTATTCTTTGCCTACCTGCAGTTAATTATGTAGACATCTG
CTTGATTGAGTGGGAGACTGTGACTGACATCCATGTATCTAGGCGCCTGCAGCAGGAAAA
TGCCAAACACAGCATGCTTCTGATGTT
gtatgtgtgctttcctgcatggaggctgtcatccaaagtggagggtgcacaagacgctca
gcttataaggatgggctgcatgtgttggtcattcagtcagcaaatactcagttaaatacc
cctgggtgcctagcactgtacttggcaaaaaggacataagggtaaacaaattgaagtcct

Exon  3 +       8928       9071   0    Initial    144    76        Good
tggtgatggttgctattctaatttatgcttaatgtcatgggtcattggaagtaatattgt
atatgaaaagttagttccagtccattggagcagctttactcatttctcagtatagataat
gaattttaatcctttaatcagtctgattacaagctaaaaattttaaaatatatttttaga
ATGGCCCCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGT
GCAAGAAAAGGCAAGAGAAAGACCGTGAAAGCTGTCATCGATAGGTTTCTTCGACTTCAT
TGTGGCCTTTGGGTGAGGAGAAAG
gtgagtcttcacactgttactaaattgaaaaaggaatgtgaggccgggcgtggtggctca
cgcctataatcccagcactttggcgggtggatcataaggtcaggagttcaagaccagctt
ggccaacatggtgaaactccatctctactaaaaatacaaaaattaggcgtggtggcaggc

--------------------------------------------------------------------------------