--------------------------------------------------------------------------------
GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (4101 bp)
--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +        657        682   2   Internal     26   100   Excellent
aaaaaaattattataaacataggtttgtgaccttgatgtggaaggcagctagaatctctg
cttttagagggctaagcaacaccaggcagccttcaatcttagaagggttaagctgaaagg
gtctcaaaaggtcacgtggtttatataatcctacctgcagaagacccccccccccgccag
GCACAACGATTTTACAGACGAGGAAT
gtgaggtgcggagaggttaaggaaggatttatcttatttgcataaggagtggaagaactg
aaaccgaagccccagttccttgactgtaaatcccgcacttgcttccaactgtctttcatc
cagattatgggattcagctgcctctgaaaacctgtagcccaataatggttattccccagg

Exon  2 +       1126       1266   1   Internal    141   100   Excellent
ttcactcatcgtcaccgctacctgaaaaccctggccgggtgctggggcttgaggagcagt
tcccacttcccagtctttttcacttttcacagctgcaaagttcagggagttgaactgcag
tgctttcagttcactgctcactctgccacgatcaatctctgttgtaaattttcctcccag
AGCACGTGACGATGCACTTCTTGACTATATATCCCAACTGCAGCAGCGGAGTTGTCAGAG
CGCAGAGCCGGACAGAGCAGAAGAACCCTCTTGGACTGGACGATTTGGGAATTCAAAACT
TGGGACAAACTGTCAGCCTTG
gtaagtcagcaaggctacactttgctttcagaaacatttgaaagagggacatttttgcca
attaatagatgaatttttttcctttattttcttcctgcttttctttgttctaaggaaaca
ttgttttgaatttaaaatagtttggttttggaaacacaatgtaaactttgtttctgctca

Exon  3 +       1800       2335   1   Terminal    536    91   Excellent
tcccgtgcactccaagccctcatagctcactcttgtcagctgtttggcgaaccctcttat
gctatttctttcatgcacttttaagcttttttggtattgcagttccacaaacctcgtgct
cccccacctccctgtgcccaggacctgggggagagttctaacctgcggctttttccccag
CCCCTGCTGTGGAGGCAGCCTCAATGCTGAAAATGGAGCCTCTGAACAGCACGCACCCCG
GCACCGCCGCCTCCAGCAGCCCCCTGGAGTCCCGTGCGGCCGGCGGCGGCAGCGGCAATG
GCAACGAGTACTTCTACATTCTGGTTGTCATGTCCTTCTACGGCATTTTCTTGATCGGAA
TCATGCTGGGCTACATGAAATCCAAGAGGCGGGAGAAGAAGTCCAGCCTCCTGCTGCTGT
ACAAAGACGAGGAGCGGCTCTGGGGGGAGGCCATGAAGCCGCTGCCTGTGGTGTCGGGCC
TGAGGTCGGTGCAGGTGCCCCTGATGCTGAACATGCTGCAGGAGAGCGTGGCGCCCGCGC
TGTCCTGCACCCTCTGTTCCATGGAAGGGGACAGCGTGAGCTCCGAGTCCTCCTCCCCGG
ACGTGCACCTCACCATTCAGGAGGAGGGGGCAGACGATGAGCTGGAGGAGACCTCGGAGA
CGCCCCTCAACGAGAGCAGCGAAGGGTCCTCGGAGAACATCCATCAGAATTCCTAG
cacccccgggacccctgccggtggctccatcagccagcaaccttagagagaggaaagaca
gttttcaagtgtctggtttcactttcacagtgcggctgccactttgaagagacccttggt
aaacccctgattcggggtggggtgggggactaggctcagccggaaccagcacctccaagg

--------------------------------------------------------------------------------