GENSCAN 1.0	Date run: 16-Jan-104	Time: 00:48:40

Sequence MRPS5_1 : 37196 bp : 41.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    313    308    6                              -1.75
 1.02 Term -   1083    978  106  2  1   54   55   171 0.931   7.30
 1.01 Init -   1770   1274  497  0  2   51   60   277 0.480  15.82
 1.00 Prom -   4045   4006   40                              -5.15

 2.01 Init +   4973   5015   43  1  1   68   87    31 0.514   1.63
gcctgtaggccatgctgaggagttttgactttgttctgaagatagtagggagtcagagaa
taatctatcagagctgtgaagtgaccagacctgttattttagaaaagccatgaagcagag
ggggagagattgaaattgggaaacctgctaggaaacttgttactctgtggctgagtggtg
ATGAGGCTTGAGCAAAGAAGGGGCATTGAGGCCACAGGAAAAG
gtacagctggcaggtgcattgatttttgaggagactgaagggcttggtaactggttggat
gtgagggtgaagggagaagatgaggtatggtgtcagctacttgacaagttgtcctggagc
ccagaaattacttactccctcgtcttggttctttattctatagatatattttgtgggtgt

 2.02 Intr +  13164  13289  126  1  0   20   92   136 0.975   6.93
ggctttccaagtgtaaccgtctgatgtgtgcaaaggatgatttaattttgctttcattac
ctcagtgatgcatgggtaaagctgtaagctgacctccacttctcttattattcaatagga
gatcatagaccattgcttgaaaactacagaattaagaaaagaaaccctgtttcgttacag
TGACTGCAGATGAGCTGTGGAAAGGCGCTTTAGCAGAGACTGGTGCTGGAGCAAAAAAAG
GAAGAGGCAAAAGAACTAAAAAGAAGAAAAGAAAGGATCTGAACAGGGGTCAGATCATTG
GTGAAG
gtaaacttatttataaaaatagctaaagtgctttgtaagtttcttaccccagattttata
gatattttacaaactagaagcatcaaaacatttcttatgaagggcactacgatctatggt
tttagaattcaaccagttgacttactcattgccccaggattctgggggaggaaaatccca

 2.03 Intr +  14797  15030  234  2  0   72   54   226 0.794  14.34
taataccatgaagtatatttaaaattttgattgtgccaagtgacctaccaagttaataat
gttagcttaagctccagtgaacagtgtgtcatcattatctgtacatgcattgcctgacat
tttaacacttgaaaaatgagtactttaacaaaattattatttatatttttaaaccttcag
GGCGTTATGGTTTTCTATGGCCCGGACTGAATGTCCCTCTTATGAAAAATGGAGCAGTGC
AGACCATTGCCCAAAGAAGCAAGGAAGAGCAGGAGAAGGTGGAGGCAGACATGATCCAGC
AGAGAGAAGAGTGGGACCGAAAGAAGAAGATGAAGGTTAAACGGGAGCGAGGATGGAGTG
GAAACTCATGGGGAGGCATCAGTCTTGGCCCCCCTGACCCTGGTCCCTGTGGAG
gtagcaaactcctggttttgtttgcctttgtgacagagagtacttgtagtttagaatttc
cttgaaatggtgttattacttgtctgtttatactacctttttccaaaaaagatttgaaca
tctttgaaataacatatcacatcaatatcccaactgtattttgtggagtgcagaagtatt

 2.04 Intr +  16748  16782   35  0  2  121   80    30 0.456   2.52
taactggtggagcagtctctagtgatgaggggtgactggggcatggccttgagagtggga
ccaaaagatctgagattctttctccccgaaaggtctgtgatggtgcctgtgttgaaaatg
ctttcatgttaattgtgtacacacatttcatctgtatccctgtttcttttctccctacag
AAACATATGAGGATTTTGATACCAGGATACTTGAG
gtaggcatgcagaattaaatacctggttaagcctttggagaggttggggtgggtggggca
gggacagggcaagaggaactgtaagggaaggccttggatgcatgactatttctgacacac
agctgatctgcgtaaggaaaattgtgcaactttaatttcagttactggatactggctctt

 2.05 Intr +  17467  17610  144  0  0   59   87    36 0.500   0.16
aaaatagccaacttccctttgagctggcactgaatgctcagtgttaaataccatgtggaa
taaccatttattgagtttgtgattgagcctctgaatgtatgtattgtttcctcaatatca
attgcactgtaggatttaaaatgtttacacatattatgtctttggtattcccacttacag
CTTTTAGAAGTTAATCTCTTTGAAGAATTTGTATATATGTGGGTGATTTTCTATAAGATC
CACAGAGGTGGATTCAAGCTCCCTTTTCTTTTAACCCCATTTTATGGGGAAGAGACAGCT
ATGCACCAGAGAGCCAGCTGCCAC
gtaagcagtttagttaacagtttaatagttcctggccttttttttttttctgaggtggag
tcttgctgtgttgccagtctggagtacagtggtatcggctcactgcaagctccacctccc
gggttgacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcctgcca

 2.06 Term +  18475  18681  207  0  0   96   40   146 0.885   6.96
tccaggaggaggttttgtttggaaaaaggctgttacttgtgctcaggagttggaggatgg
tgtgcctgttctctgtgtgtgcctgttcaccgtgtatgcctgcaaggaaggcggctccct
ccagttccctccttcagattttcttaatgtgcaatatttatgagacattttgccttttag
GTAAGAAACGTTTTCACTATGACTGCGAAAGAGGGAAGAAAGAAATCGATCCGTGTCTTG
GTGGCTGTGGGGAACGGAAAAGGAGCTGCAGGTGAATGGGGAGTGATGGCATCACAGTGG
CGGTGGTGTGCAGGGAAAGGCGTGGCACGGGCCATGCTGTGGAGCCCATGGGCTCATGCT
GCTGGCCGGACTTTTTCCATTGATTAA
accttttagtggtttgggttcacaaagcttgtggtaagtccatgacttcccttagagaga
aaagagagaatagattctactgtacttgccttttcctctgaggaaaaggaatattataaa
aggctgaagacattattttattatgtataatagtggaaaattagggagaaaaactaaatg

 3.02 PlyA -  24306  24301    6                               1.05
 3.01 Sngl -  27115  25547 1569  1  0   61   47   435 0.883  31.80
 3.00 Prom -  27216  27177   40                             -11.14

 4.02 PlyA -  27307  27302    6                              -0.45
 4.01 Sngl -  28186  27419  768  1  0   27   32   356 0.738  19.72
 4.00 Prom -  30520  30481   40                              -8.75

 5.01 Init +  31830  31881   52  2  1   53  100    88 0.834   7.87
ttgccaggtactgctctgggctctggggacaccgcggtaaacaatatcctggccctcatg
ggagccatcttctactcaggggaagcattggataaacaggtttcgttgagtgccctaatc
agggtactgtgttagagtaggagggaggaaggcagaaggaaggatgccaccttgaatagc
ATGGTCACAGAAGGCCTGTCTGAAGAGGAGCAATTTGAGTGGGACCTTGAAG
gtgagaaggagccaagggggcagagctgggaggacattccaggcagagggaatcccaagt
gcagtccttaaggtgaggaagccagcaggaggtggcgtgtctctagatgaggtcagggag
gtgggcgggcaggactcaggcacagaaggctctgaataggccatggtgctctttatatta

 5.02 Intr +  32683  32819  137  2  2  120   89    86 0.984  11.27
agtaagtgtcatcttggaagttaagtaagttgtcaagggtcagctcactaggaagtggtg
ataccagaatatgaaccagtttcccgaagcccagagcctgaagccatgcgaaagccagca
gggtgactcctccggctgcaggcgagtgggctgtgtttcacccggtttctccttttctag
GTTACGGCCTCCGCTGCCACAGGGCCATCATCACCATCTGCCGGCTCATTGGCATCAAAG
ACATGTATGCCAAGGTCTCTGGGTCCATTAATATGCTCAGCCTCACCCAGGGCCTCTTCC
GTGGGCTCTCCAGACAG
gtaatcctttcccggggtctgaaacagaggttctagtttgtatttcagttgtgtgtgttg
gggctacgatgccctggggcctcctggagatgctttcctggggccacctgaggagttggg
cattctttgttgtctgtgactgcatcagtttagttaaatccattgacaagttcatgaaaa

 5.03 Term +  35624  35848  225  1  0   80   37   250 0.974  14.90
ctgaaatgactccacccatgacaggttattagagtttagccacaaaacacattaacccaa
atccactgaaatggcctttgaatacccccaggctgtactgttgtggcctgtggaagttcc
tgctctttatgttgcaaatgtacttcagacctaacctgttctgaatttggtcttgcttag
GAAACCCATCAACAGCTGGCTGATAAGAAGGGCCTCCATGTTGTGGAAATCCGGGAGGAA
TGTGGCCCTCTGCCCATTGTGGTTGCGTCCCCCCGGGGGCCCTTGAGGAAGGATCCAGAG
CCAGAAGATGAGGTTCCAGACGTCAAACTGGACTGGGAAGATGTGAAGACTGCACAGGGA
ATGAAGCGCTCTGTGTGGTCTAATTTGAAGAGAGCCGCCACGTAA
cctctctggccttgtgcagccagttcctgtgctgccctgcacctaggagagactcagccc
ctcacagcttgggatgttaccttgccttttgtttgttttgagggaagtttaatctttaaa
ctctttggaaataaataattatagctttcatttgttgagcacatgttatatgccaatgtg

Predicted peptide sequence(s):


>MRPS5_1|GENSCAN_predicted_peptide_1|200_aa
MLASFRSSSPSTLKRFRELGRTLKNDVQFPLILQTRAPRPREGEDARKVTQRLRRKVGAR
REEPGAAASRFPPPRLLQAPGEPPTPGPLRAPAPGVPALTCRPATQHGEAAHSAHRGRHA
GVRAAPRPPPRAALPTAYRDCSSSNGKPWAAAEFLRPESTQQRRPGSSEGVRWRGTLGLT
RAGTADPCEVHRSTEGGQVQ

>MRPS5_1|GENSCAN_predicted_peptide_2|262_aa
MRLEQRRGIEATGKVTADELWKGALAETGAGAKKGRGKRTKKKKRKDLNRGQIIGEGRYG
FLWPGLNVPLMKNGAVQTIAQRSKEEQEKVEADMIQQREEWDRKKKMKVKRERGWSGNSW
GGISLGPPDPGPCGETYEDFDTRILELLEVNLFEEFVYMWVIFYKIHRGGFKLPFLLTPF
YGEETAMHQRASCHVRNVFTMTAKEGRKKSIRVLVAVGNGKGAAGEWGVMASQWRWCAGK
GVARAMLWSPWAHAAGRTFSID

>MRPS5_1|GENSCAN_predicted_peptide_3|522_aa
MNKFLDTYTLPRLNQEEVESLNRPTTGSEIEAIINSLPTKKSPGPDRFIAKFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILILKPGRDTTKNKENFRPISLMNIDAKILNKIL
ANQIQQHIKKLIHHDQASFIPGMQGWFNICKSINILHHINRTKCQNHMIISIDAEKAFNK
IQQPFMLKTLNTLGIDGTHLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGSPLSPLL
FNILLEVLARATTQEKEIKGIQLGKEEVKLSLFADNMIVYLENPIVSAQNLLKLISNFSK
VSGYKINVQKSQAFLYTNNRPTDSQIMSELPLTIATKRIKYLGIQLTKDVKDLFKENCKS
LLNEIKEDTNKWKNIPCSWIGRISIVKMAMLPKVIYRFNAIPIKLPMTFFTELENTTLKC
IWSIWNQKRARIAKTILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEA
SETTPHIYNHLIFDKPDKNKKWGKDSLFNKWYWENWLAICRK

>MRPS5_1|GENSCAN_predicted_peptide_4|255_aa
MDGGRSTKQMESKKTAEVTILVSDKTDFKPTKIKRDKEGHYIMVKASIQQELIILNIYAS
NTGAPRFIKQVLRDLQRDFDSHTIIMGDFNTPLSILDRSMTQKVNKDIQEADLIDIYRTL
HSKSTEHTFFSAPHRTYSKVDHVVGSKALLSKCKRTEITTNCLSDHSAIKLELRIKKLTQ
NRSTTWKLNNLLLNDYWVNNKIKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNA
HKRKQERSKIDTLTS

>MRPS5_1|GENSCAN_predicted_peptide_5|137_aa
MVTEGLSEEEQFEWDLEGYGLRCHRAIITICRLIGIKDMYAKVSGSINMLSLTQGLFRGL
SRQETHQQLADKKGLHVVEIREECGPLPIVVASPRGPLRKDPEPEDEVPDVKLDWEDVKT
AQGMKRSVWSNLKRAAT