GENSCAN 1.0	Date run: 15-Jan-104	Time: 23:29:54

Sequence KIF3C_1 : 57871 bp : 48.37% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   1354   2970 1617  0  0   95   54  2719 0.956 263.74
gcccggactgcagcagcgttggggccacctcccagcgtccccaccctaggaggctgcatg
cggattgaagagctgcgcctgggggctgggccggccccgctgatcccgacctagcgagca
ggatagcaggaccgcccaggctgcggaggggctcgggggcaggaaggtcagagcagcaag
ATGGCCAGTAAGACCAAGGCCAGCGAGGCCCTCAAGGTGGTGGCCCGGTGCCGCCCCCTC
AGCAGGAAGGAGGAGGCTGCTGGTCACGAGCAGATCCTGACCATGGACGTGAAACTGGGC
CAGGTGACCCTGCGGAACCCCCGCGCCGCCCCGGGGGAGCTGCCCAAGACCTTCACCTTT
GACGCCGTGTATGATGCCAGCTCCAAGCAGGCCGACCTGTATGACGAAACCGTGAGGCCC
CTGATAGACTCCGTGCTCCAGGGTTTCAATGGCACGGTGTTTGCCTATGGCCAGACGGGC
ACTGGCAAGACCTATACCATGCAGGGGACCTGGGTGGAGCCCGAGCTGCGCGGGGTCATC
CCGAATGCCTTTGAGCACATCTTCACCCACATCTCCCGCTCCCAGAACCAACAGTACCTG
GTCCGGGCCTCCTATTTGGAGATCTACCAGGAAGAGATTCGAGACCTGCTCTCCAAGGAG
CCGGGCAAGAGGCTAGAGCTGAAAGAGAACCCCGAGACTGGCGTCTACATCAAGGACCTC
TCCTCCTTCGTCACCAAGAATGTCAAGGAGATTGAGCATGTGATGAACCTGGGGAACCAG
ACCCGGGCTGTGGGCAGCACCCACATGAATGAGGTCAGCTCCCGCTCCCATGCCATCTTC
ATCATCACTGTGGAGTGCAGCGAACGTGGCTCTGATGGCCAGGACCACATCCGAGTGGGC
AAGCTCAACCTCGTGGACCTGGCTGGCAGCGAGAGGCAGAACAAGGCAGGCCCCAACACA
GCGGGAGGGGCAGCCACACCATCCTCGGGTGGCGGTGGTGGCGGTGGAGGCAGTGGTGGT
GGTGCTGGTGGAGAGAGGCCTAAGGAAGCCTCCAAAATCAACCTCTCATTATCTGCCCTG
GGCAACGTGATTGCTGCCCTGGCGGGCAACAGGAGCACCCACATTCCCTACCGGGACTCC
AAGCTGACCCGGCTGCTCCAGGACTCCCTGGGGGGGAATGCCAAGACCATCATGGTAGCC
ACACTGGGGCCAGCTTCTCACAGCTACGATGAGAGCCTCTCCACCTTGCGCTTTGCCAAC
CGAGCCAAGAACATCAAGAACAAGCCCCAGGTGAACGAGGACCCCAAGGACACACTGCTG
CGGGAATTCCAAGAGGAGATTGCCCGCCTGAAGGCCCAGCTGGAGAAGAGGGGGATGCTG
GGGAAGCGGCCCCGGAGGAAGAGCAGCCGCAGGAAGAAGGCCGTGTCCGCCCCGCCTGGG
TACCCTGAGGGCCCAGTGATTGAGGCCTGGGTGGCAGAAGAGGAGGATGACAACAACAAC
AACCACCGCCCGCCCCAGCCCATCCTGGAGTCAGCCTTGGAGAAGAACATGGAGAATTAC
CTGCAGGAACAGAAGGAGCGGCTGGAGGAGGAGAAGGCAGCCATCCAGGATGACCGCAGC
CTGGTGAGCGAGGAGAAGCAGAAGCTGCTGGAGGAGAAGGAGAAGATGCTGGAGGACCTG
CGGCGGGAACAGCAGGCCACAGAGCTGCTTGCGGCCAAGTACAAGGTAAGGGCCCCAGAG
GAGCTGGGCACTCGAGATGTCCCCGCAGGGGATCCCGGCAAGGAGGCTCTTCTTTGA
gagtctgtgacctggcctgaagtggaggttctccctcagcaccgcacactgccctcctgc
caaatgtgcccccagagcagccaggcaaattgctgtgataccgggctgccaggtacatgc
acaggcacacacacacgaagcaacgtggacaggcggtctctcaagccagtgagcttgggg

 2.01 Init +   9470   9556   87  1  0   92   42   151 0.448   9.54
ctaatagatgttttcacttggccaccttcctgatatattaaacacatcacattttagttt
ggcattcaaggcgcttcagagtctgactgcaatgcatctcttctatcttgcctgcccaag
ccggttactccaataggaaaaccctgcaccagctgttctaccccttcctttgaaatcaac
ATGGGCCTCCCTATCCTACTGCTGATTGCACTGTTTTTGTGTCCTGGATTGTTGCTGGTA
ACCAGGGAGTACGAATTATGGAAGCAG
gttaagcttaatttaaagatctctttaacagttaaaattgggctgtttcaagaagaaata
ggtggccttgatggtggtgatgatttcacggttgtatacctgtccccaaattcattgagt
tgtatacattaaatatgtacagcttttttttttttttttttgagacagagtctcactctg

 2.02 Intr +  23450  23477   28  1  1   90   79    35 0.193   0.49
gggtctcagggttgaaatggacaagcgtgtcccagattcagaggccaggccagacagcag
gctcctgaagacctgtgacccagtagttaggggatcaggtatccatggtccacaacagta
ggggcctcctccatgtggttcttctcttttctctcacacccaccccacccctcctgccag
GTTCCCCAGATGATCGGGCCCCATGACA
gtgagtgtggattgatgaatgggaggagaaactgggataaagagagcccaaggtggccgg
gtgcagtggctcacacctgtaatcccagcactttgggaggctgaggcaggcggatcactt
gaggtcaggagttcgagaccagcctggccaacacggcaaaaccccatctctactaaaaat

 2.03 Intr +  25594  25646   53  2  2   77   96    40 0.888   2.33
cttcctcctgccttggcctctgaggctgtgtggggctggaatgaagctcgtgcctctctg
gcgggcccaacttgctcagcgtctttgggtgacaaagcctcacacagcccattccttgac
ctcccaaaagccactgttaacccctgtctggctgtgttcccaatgatgtggctcttacag
GTGGTCTCCTGCTCCCCAAGTCTGACAGCACCCCCTGCTTTGAGATCCCTCAG
gtaggtcagctgtttccactgggaaaaattccagtggagaagcagccagctttttccact
ggttcaaggtgatttcaaccttccaggaggcccgtgatgaagccagaggacaactgggta
ccctgggacagcaccttcttcttattttattttcattttctaaaatttcaaatcgggcac

 2.04 Intr +  26827  26928  102  0  0  105   91   168 0.987  19.17
ctgggacctgagacactagaggggaaaactccattctccctgaaagccacaaggccccat
ctgggacacatctggtgtccactcccagaaggaccacagagcagggaagcaaaatctctc
cagctagcaatgttgtggaccctttgcaaagcccacctcccaacccctctgtgtccccag
GCCATGGAGAGCAAGCTCCTCATCGGGGGCAGGAACATCATGGATCACACCAACGAACAG
CAGAAGATGTTGGAACTGAAGAGGCAGGAGATTGCCGAGCAG
gtagggcctccaggtgccaggtccccttggagagtgtggcctgcagctcatgtctgggag
gtgcagggccgtaaaccatggtggactctggatctctggaattacagtgctgagaatctc
agacatgccaccctgggtcccacaggtctactagcccagggtcttccctttggcaggggc

 2.05 Intr +  27608  27730  123  1  0   69  100   249 0.999  24.98
gggaactgagaggagggttcccaggggctctgcaggattgggtgggagcagtggatgtgg
gccatgggccatggtgaagccaggtcccgagacaggcagagtgagccagtcccctgagct
ttcctggccctcccgagtatgcactgctcctttgagccacactgcccgtccttggcctag
AAACGTCGTGAGCGGGAGATGCAGCAGGAGATGATGCTCCGGGACGAGGAGACTATGGAG
CTCCGGGGCACCTACACATCCCTGCAGCAGGAGGTGGAGGTCAAAACCAAGAAACTCAAG
AAG
gtgagacgctgcagcaggaccggttaaggtgtgctggaggcccagcagtctctgcccaag
ggatgtgtgcttcagggactcctccccatttggctggaactgctgaacccctgagtgaca
tggcttggcctcgggggtgagcaacagggggaggcaggaggcgggggctgggggtggagt

 2.06 Intr +  28886  29004  119  1  2   54   30   273 0.998  17.36
taaatagcccagcccaattcgtggtgggttgggcacagcggggagttcagaaaaggaccc
gcagcctcatcctgggctgagtcggtagactctgagcctgcagccctgcggcccaggctg
ggtgactggggcctcgttgccacaccaagcagcctctgagtggcacctgtccccacccag
CTCTACGCCAAGCTGCAGGCGGTGAAGGCGGAGATCCAGGACCAGCATGATGAGTATATC
CGCGTGCGGCAGGACCTGGAGGAGGCGCAGAACGAGCAGACCCGCGAACTCAAGCTCAA
gtagggcccgcagctcttttcatcccgggtccccacagccagccatcattactcaggcct
ctcctcccctaaggcctcatcctgactgtctcctctcccatgagtcctttaggaataaaa
tgcgtctgagggctgagggatgggcccacgtgctggagtttcttctacctcctctgcctg

 2.07 Intr +  31366  31482  117  1  0   99   67   231 0.111  21.68
tctcctgacctcgtgatccgcccgccttggtctcccaaagtgctgggattacaggcgtga
gccaccgtgcccagccccctctgcctcttggcttgttgcttctaatccttcaaccctcac
atgcaccacgtggtctctcgctcacccattttcccatcactccttcattcctgctcccag
GTACCTAATCATCGAGAACTTCATCCCGCCGGAGGAGAAGAACAAGATCATGAACCGGCT
TTTCCTGGACTGTGAGGAGGAGCAGTGGAAGTTCCAGCCACTGGTGCCAGCCGGCGT
gtgagtctctaacccagctgtctgggctgggggacttgtgggtccactccaggtcggggc
tggtgaggggcctgaggccttgcctgcagggagacagatgttttgtggattggggaaaag
atggggaggatgccgatgggggatgaatttctcaggatctaattgtaggggtctctatga

 2.08 Intr +  53208  53316  109  0  1   43   90   146 0.020  10.59
atgagggggacaactgcactagcttcagttgtcaagctgtattagagcaaggagaagaaa
attccagaacttgcagtctgcagggcctcctagctacctgaatgatatttaggtcctcat
gatgtcatttgctgtttgtgttccacagaaatcctttctaatatagcctctttcctacag
CAGTAGCAGCCAGATGAAGAAGCGGCCAACATCTGCAGTGGGCTACAAGAGGCCTATCAG
CCAGTATGCTCGGGTTGCCATGGCAATGGGGTCCCACCCCAGGTACAGG
gtaagaagcggagaggggagaaagagcctacgggagggaggccgggcgaggtgtctcaca
cctgtaatcccagcactgtgggaggccgaggcaggtggatcacctgaggtcaggagttcg
agaccagcctggttaacatggtgaacccctgtctctactaaaaatacaaaaattagccag

 2.09 Intr +  53794  53966  173  0  2   64   65    85 0.600   2.54
ggcaacagagtgagactccatctcagaagaaaaaaaaaaaagagcctatgggaggggatg
ctcacagcctctgcttcccctaaccacctcatcagccctgctacacccaagactggctga
gtccctagaaggcacagtgactgggcactgttcaagcctggcatgatattcccaccacag
GCTGAAAACATAATGTTTCTGGAGTTGGATGTGTCCCCTCCAGCTGTCTTTGAGATGGAA
TTCTCTCACGACCAAGAACAAGACCCTCGTGCGCTACACATGGAGAGGCTCATGCGATTG
GACAGCTTTCTGGAAAGACCTTCCACGTCTAAAGTCCGAAAGTCCAGATCCTG
gtcagtacctccatggtcccaggcagcactggacccaggaggcaggggaactgcaggcgc
tgggtgatgctaaagagggttttgctggtacccgaagggcaggaagggcaaggggtgact
ggggatgtcagaaggattcctgcagcaacaggatggggcaaaggagaggacccactttcc

 2.10 Term +  54917  55031  115  2  1   76   53    65 0.372  -0.16
ggactgggagactgcttggtgttccctgaggacaagagacatcctgacagtgttgggcat
ctgctccccgtggacacagccccactctccactttctgagcctcagacaacctcattcag
cctcttgggctccttttcaaggacattaataacctcaccaacatagctcatgcccttcag
CTTTGACAAGAACTCACAGCTTCCCAAACTCTGCTTTCTGCCCACCTTGGATGGGAACTG
TGGACCAAGCAATTACCATCGCCTTGGAACCTGCAGGAAATGGAACAGCAATTGA
gacaacttgaacagtcatcaacggaagtccctccactggattcctttgtttctgtcccct
ccgaggagtcattttggtcgacaggctctcaaggcaactccccattttcaagaggctgct
cctgcctgcttcgatcatttctccctgcagctgcctagaccccgttcacagtgggaggag

Predicted peptide sequence(s):


>KIF3C_1|GENSCAN_predicted_peptide_1|538_aa
MASKTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTF
DAVYDASSKQADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVI
PNAFEHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKEPGKRLELKENPETGVYIKDL
SSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVG
KLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSAL
GNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFAN
RAKNIKNKPQVNEDPKDTLLREFQEEIARLKAQLEKRGMLGKRPRRKSSRRKKAVSAPPG
YPEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEKAAIQDDRS
LVSEEKQKLLEEKEKMLEDLRREQQATELLAAKYKVRAPEELGTRDVPAGDPGKEALL

>KIF3C_1|GENSCAN_predicted_peptide_2|341_aa
MGLPILLLIALFLCPGLLLVTREYELWKQVPQMIGPHDSGLLLPKSDSTPCFEIPQAMES
KLLIGGRNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEMMLRDEETMELRGTYTSLQQ
EVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQDLEEAQNEQTRELKLKYLIIENFIP
PEEKNKIMNRLFLDCEEEQWKFQPLVPAGVSSSQMKKRPTSAVGYKRPISQYARVAMAMG
SHPRYRAENIMFLELDVSPPAVFEMEFSHDQEQDPRALHMERLMRLDSFLERPSTSKVRK
SRSCFDKNSQLPKLCFLPTLDGNCGPSNYHRLGTCRKWNSN