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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (7695 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1394       1594   0    Initial    201    90   Excellent
gcagcggcctactctcgcactgcagacggggaaactgaggcctgaggcggccggggtggg
gcagacctcccggcgagcccgagcccccgcccccggctagccccgccctggcccgtaaga
agcacccggggcgcgaggcgaaggcgcacagcgcggggccaggctgggtccagcagcgcg
ATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGCC
CGCGGGCCAGGGGGCAGTCCCGGGGGGCTGCAGAAGCGGCACGCGCGCGTCACCGTCAAG
TATGACCGGCGGGAGCTGCAGCGGCGGCTGGACGTGGAGAAGTGGATCGACGGGCGCCTG
GAGGAGCTGTACCGCGGCATG
gtgagcccggggagggctcgggggtggtcggggacagatagagcccgggcgcggagaccc
cacgcccttggggtctcggtgcacactcgctggtgcacggccagcctggtctgcacaaga
ggacgagcgccccagggccgggcactcattggcctggccatccgtgctctatggcattgt

Exon  2 +       4759       4839   0   Internal     81   100   Excellent
tcacccctcccccccaacacccagatgtcccgtcttggcagtgctgtcccggactgccac
attaatgctccagaacccgccagctgggccctggggccggtggggctcctgcagagccct
ggacaaaggcgagggagggagggaaggggatcctaagcacccctccctccctggccctag
GAGGCAGACATGCCCGATGAGATCAACATTGATGAATTGTTGGAGTTAGAGAGTGAAGAG
GAGAGAAGCCGGAAAATCCAG
gtaggtggggggacgtgtcccccagcctcccactttgcacctccctaaaaataatagcaa
tagttcacgtgtttactgagtgctcactagatgccgggcactggtgtgatggctttacat
gtattcactcacttaaccctcacaaaaccctccgaagcaggcgctagtgtgagctccatt

Exon  3 +       6287       6415   0   Terminal    129    56    Marginal
cccatctctgtctttctcccggctcacttttctctctatgtctatagcctccgcccctaa
ctccccccaccccacaatcagagaacaggaggaggcgcccaggtcagggactgggctgga
caggggcagagggtgcccccgcactgttcccatgttctcagctcccccaccctgtctcag
GACTTCATCCAGGAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCAGCCCGGCCTCCGC
CAGCCAAGCCCCTCCCACGACGGCAGCCTCAGCCCCCTCCAGGACCGGGCCCGGACTGCT
CACCCCTGA
ccctcttgcactctccctgccccccggacgccgcccagcttgcttgtgtataagttgtat
ttaatggttctgtaacaataacactgtgtggctgtttttcctccccccgggttaccatgg
gcttccccgagctccccccacaacctccctctctcctcctgtggcctctgctcatgtccc

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