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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (24981 bp)
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PERCEVAL Exon Candidates (20 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       2290       2436   1   Internal    147    77        Good
gggcctgggcttctgggtctgagggaggaggggctgggggcctggactcctggatctgag
agaggagggactggggcctggactcctgggtatgaaggaggaggaggggctgggggcctg
gactcctgagtctgagggcggaggggctggggtcctgaagtatgactctgcccgactcag
GGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCT
CGGACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGCAGGAGATCTACCTCTCTGGCC
TGCGCTCCTGGAAAAGGCATCTCTCAC
gtttctgggtgaggagcggtgctggtcggtttccttccggggatccaggtttctgcttcc
gggatgtctgaggctcacttccggcatttcagctggttcatttctgggagactatcaccc
ctttttcttagaattttgatgtctgctcccaggacccctttagcaatttctccgtggctc

Exon  2 +       4202       4302   1   Terminal    101    61    Marginal
aggagaatggcgtgaatccgggaggcggagcttgcagtgagccaagatggcgccactgca
ctccagcctgggcgacagagcgagactccgtctcaaaaaaaaataaaataaaataaaaaa
taaataaataaataaataaataaataaataaataataaagacagaatcctgcttttatag
AGTTCTCATTCGAGTTGGGGGAGAAGGCAATAAAACAGATGAGCAAAACAGAAGGCAATA
AAACAGATGAGCAAAATATAGGGTATGGTGACATTCTATAG
tgtcatctgatattgatggtgacacatgctatggtgaatgataaatcgggtagagaagag
tgatgtgggggtgttgcagttaaataagggggtggcaggccaggtgcggtggctcacgcc
tgtaatcccagcactttgggaagccaaggcagacagatcacgaagtcaggagttcaagac

Exon  3 +       6557       6653   2   Internal     97    99   Excellent
aggagtttagttagtaacgcagtgctgttggtcgttcctcattcattccatgccctggta
cttctagaaggccttactgagctccagaccctgctctgaatagggatcatttttcttttt
cttttcttttcttttttttttttttttttgagacagggtcttacttactttgttacccag
GCTGGAGTGCAGTGTCACCATCACAGCTCACTTCATCCCTGAACTCCTGGGCTCAAGCGA
TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAG
gtgtgtgccactgcgcctaatttttttttctttctttttttttttttggagaccttgtct
tgctctgtcacccaggctggagtgcagtagcgtgatcttggatcactgcaacctcagcct
cccgggctccagcgattctcgtgcctcagtctcccaagtagttgggattacaggtgcctg

Exon  4 +       7436       7516   2   Internal     81    95   Excellent
agatcttgagcctccagctcagggctccgcactgggtgctcagtaatgtctggggatggc
acagaacaggggctcagaggagagggcagatgattcaatggatgccctttcctccccaca
gaatgactttctcaccggtgtgtttcctgccagccccctcagttggcttttcctcttcag
TGCCATCCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGAT
CAAAGAGTTGCTGCCTGACTG
gtgaggtccccccactccagcccagtaacccccaatcactctcccttcacccagtaagtt
cctctgtcattgtggtgtacctgctaaagaaaagtaacctctgagacttacattgggtca
gattaataaaggcatggcatgaagaaaaaggaggtgaggccgggcacagtggctcacccc

Exon  5 +      10735      10906   2   Internal    172    93   Excellent
ggtgctgccacaatgggagggggctggagggggtgacagagctcacacctactaaaatga
caaaaatgggtttctctgtctgacagccaaaagatcagcgcaggggctggagggggctgg
aagggagggaggttctgaggccaggagacccaggcccagcctctgtttctctccccgcag
GGGTGGACAACACCACGGGCTCCGGGGGGTCCTGGCAGCCGCGCTGTTTGCCTCGTGTTT
GTGGGGAGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCTGCTTCTGTCCTACCACGG
CTGGCTTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCAAGACCTGGCTG
gtatgggaggggcatagccctgctcaggctctcctgggacccgcttatctattcccctct
ctctgggtctctgtccccctctctctgggtctctgtccctctctctctgggtctcttccc
cctctctttctgggtctctgtcctcctctgtccctgggtctctgtccccctctctctggg

Exon  6 +      11368      11469   0   Internal    102   100   Excellent
ccctctctctgggtctctgtcccctgtctctgggtctctgttcctttctctcttggggtc
tccgatgctcttaagtctctgtgtccttctctttgggtttctgtcccactgtcgacccct
gccccgtcaactccctggctccggtgaggggttaatgacccggtaactcctcctccccag
GCCCTGGTCCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTG
CCACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAG
gtgggcctgggagcgcgcagacgggctggggcggccggggcgggccgggggcgtgacctg
ccctcttctcccctttagtacctggagtcggtccggcccatcctctccgacgaggacttc
gactggaccgcggtcctggcgcaggaattcctgaggctgcaggcgtcgctgctgcagtgg

Exon  7 +      11548      11685   0   Internal    138   100   Excellent
gccctggtccgcatcttctctggccgccacccgatgctgttcagttaccagcgctccctg
ccacgccagcccgtgccctctgtgcaggacaccgtgcgcaaggtgggcctgggagcgcgc
agacgggctggggcggccggggcgggccgggggcgtgacctgccctcttctcccctttag
TACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCTG
GCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCC
TGGTGGGCGTCCAATTAT
gtgagtcccgccaccgccaccaacgccccacctgaagggctaaggttgtgagctcgcctg
ctaaacttgcgagttatacgccctgccccacgacacgcccacaacccacacgcccccagc
ccccaagggtcaataccctgagccccgctcacatacatctatatcctaacctccacattt

Exon  8 +      14761      14853   0   Internal     93   100   Excellent
gctaactgatcccccatggatggatttctaggtgatcgctagttactgactacgatggct
gacttctttggctctatcctccctgcctgacgcaggagcatctggggccttccctgtcct
actgtccctcccccaacaggccccagcccctcactgtgtgtctccccaccccgctcccag
GTCAGTGACTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAAC
AGCAACTATTACATGATGGTGAGAAGGGGAGGG
gtgaggttcataggccccaggtctagggttggggggtacctgggcggaatgtgacggtca
tgctcagtgacctggatctagacgcgccatctgggattcatcattccaccctcttttggg
gtcaggacctgtatttgggtcagtggctccatcgggggcaaacctgaccctgggtgtttt

Exon  9 +      15058      15349   0   Internal    292    97   Excellent
agggttggggggtacctgggcggaatgtgacggtcatgctcagtgacctggatctagacg
cgccatctgggattcatcattccaccctcttttggggtcaggacctgtatttgggtcagt
ggctccatcgggggcaaacctgaccctgggtgttttgccatcccctctcctggtccccag
GACTTCCTGTATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCAT
GCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGAGGGCCC
CAGTGGGTTAGGGATGGAGGTGTGGTCCTGTGGCCTTTGGGCCACGTGGGTCCTGGAAGG
CAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCGCCCCTTATGCTCT
GCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAG
gtgagaccctctcctgtccccactgatggaggcagaacaatatagtggctaagagcatgt
tttctggagtccgcctgactgagctgggaaccattgcttccttgctgtgtgaccttctgc
acgttattaccctctctgagcctcagcttccactaaagtgggataataattgtacctagg

Exon 10 +      15304      15349   0   Internal     46    71        Good
ctcctgtaccgccaccgcctgaaccgccaggagatacccccggtgagagggccccagtgg
gttagggatggaggtgtggtcctgtggcctttgggccacgtgggtcctggaaggcagctc
acagcccacggtttcctgcagactttgctgatgggaatgcgccccttatgctctgcccag
TACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAG
gtgagaccctctcctgtccccactgatggaggcagaacaatatagtggctaagagcatgt
tttctggagtccgcctgactgagctgggaaccattgcttccttgctgtgtgaccttctgc
acgttattaccctctctgagcctcagcttccactaaagtgggataataattgtacctagg

Exon 11 +      15960      16155   1   Internal    196   100   Excellent
cagcctggcgacagagcgagaccttgtctccaaatactaagtaaataaaagtcctagggt
gctgatgattactagggtactttgaacaactgacgacacctaagaagtatataataaatg
gtcactatttttatgtgtctggccttcctgcccccatgcttctgccaacgccacccctag
ACTACATCCGCCACCTCCATGACAGCCAACACGTGGCTGTCTTCCACCGGGGCCGATTCT
TCCGCATGGGGACCCACTCCCGAAACAGCCTGCTTTCCCCGAGAGCCCTGGAGCAGCAGT
TTCAGAGAATCCTGGATGATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTC
TGACAGCTGCTCCCAG
gtaagggtcaggggtcaggggtcaggggctctcagaggccgccagtgtcctgagactgtg
gaagggcagggtggggccaggtggcggctgggcaggatggactcaggcacatcccgggcc
ctccaggggcacgtgggcccaggtgcggacatccctgaagacccaggcagcggaggccct

Exon 12 +      16282      16464   2   Internal    183    90   Excellent
ctcaccggcctgcccccacgaggaacatctggcagctctgacagctgctcccaggtaagg
gtcaggggtcaggggtcaggggctctcagaggccgccagtgtcctgagactgtggaaggg
cagggtggggccaggtggcggctgggcaggatggactcaggcacatcccgggccctccag
GGGCACGTGGGCCCAGGTGCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAGGC
GGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGCTCACCAGGGA
GGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTGCTGGCCGGCCGGGGCCATGA
TCG
gtgagtgagtcttgggatggggcccccagatgtggcacccgagaatccagtatcagacct
aggacccctgacagtagacagccagaccctggagcccacacctgcagagtctgtagacca
ggggctgcatagagctgaggaccccagacccagtgctttgggacctggagacctctgacc

Exon 13 +      17569      17674   2   Internal    106    84        Good
gtcttggagacctccagggccactactggggacccccaatggtcctagagatccccatac
cagcaccccaatggattcccacatcttcccatctagaaaaccccctcaagtcccacagaa
agcactctgaggtccccgtgcccctcgctcttggtgacccatctgaactctccctgacag
CTGGTTTGACAAATCCTTCACCCTAATCGTCTTCTCTAACGGGAAGCTGGGCCTCAGCGT
GGAGCACTCCTGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG
gtagggcggccagccctccctggttctggggacccctgccccatctccaaagaccgtcct
ctccagcgccttagtgtcagaagaaaaactgaggcttggccgggcacggtggttcatgcc
tgtaatcccagcattttgggaggccgaggtgggcggatcatgaggtcaggagttcgagac

Exon 14 +      18774      18890   0   Internal    117   100   Excellent
ttggtgttagtcctgttcttgatgaacatgaacctgagaccgcatctgtgaatatcagag
gtttctgtttctcagggactgccccctacccgaaaaagggctgcatgaaaagaggtcccg
ggttagatggcctcagtccacagggaggaagggactctaacagcctctgtttgcccacag
TTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGG
CACCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAG
gtgaggctgggtttctgggcctctcctccaagtcccaagattcctagccttgacttcaaa
ctcatccccacccctaatctgaacgtgaaaatcaaccccattcctacccccaacccgaaa
cccatgcttcccccacccccaaatcaggccatatgcatccacaacctcaaaccccaacac

Exon 15 +      20371      20535   0   Internal    165    79        Good
gcccagcccctatccccatctttagtctcatccttcaattctcttctcttctttgtcccc
atttccatattctgccgcaaccttaactccacatccacctccgcttccagccttattcct
ggctttcaccctacccccatctgtaaccccaactactcctcttccctcctcctctggcag
ATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGAC
TGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCT
TCAGACAGCTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG
gtcagttgggttccccatccacagcccccgcagggtctcagtccacctgagcccccaaga
cctgcccctccacggttccttgtggtcgctgccattgtgggtcggccatcttgaattctc
tcttccaaccattcttgggctggctggaggaggctggaggtctggacagagataggtcaa

Exon 16 +      20774      20908   0   Internal    135    99   Excellent
gacctgcccctccacggttccttgtggtcgctgccattgtgggtcggccatcttgaattc
tctcttccaaccattcttgggctggctggaggaggctggaggtctggacagagataggtc
aagtctgtaagatctcctgagcccagctgacagactcctcttctcctccctgtcccccag
GACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGC
CGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAG
GACAAAGAGAAGACG
gtgggtgcagccctcgcttgaggcttcagttatttctgtgtactcactcatccacttgca
aacgttgatgggacctactgaagccagcctccacgaggagcacaagggacaagggatgaa
tcggacctggcctctgacttcaaagagctcactgatggggggagacagcccagcatagtg

Exon 17 +      21860      22012   0   Internal    153    91   Excellent
gtgtgaacctggccaaatgatttcccctctctaagcctcagttccccatctgtaaaatgg
ggttgatattcccaccttgcagggatgtggcaaactcagttgaggccagatgtgccgcag
gcccagccctaagtcgacttcctgtctttccatgacctgtgacctccctggggactgcag
GACCCACAGTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAG
GCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCGTGTCCCGA
TTCCTCCACCTGCAGTCGCCCTTCCTGACCCAG
gttggggcacagggaaagggttagagagggaagtgggagaccatggaagaagggagaggt
ttcagggaaggagggtgatgttgaaaaaggacccatcaaggccgggcacggtggctcacg
cctgtaatcccagcagtttgggaagccgaggcaggcggatcacttgaggtcaagagttcg

Exon 18 +      22787      22900   0   Internal    114    59    Marginal
gtggtgagacgagtgaggggcgtggccagatagggcgtggtcaggagaagggcgtggtta
gggagaaggaggcccggatttacgggtaaaaaaaaagccagggatgcagggagtgaagtg
gagccaagggccggaactgcagatctctgtcctgcacatgtgatgggctcctgtcctcag
GTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTG
TTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCT
gtgagtggagctgggcgcgctggcccccagaggaaagagggggctggggggcctgcactc
ctgcatagtgggggtggaggggaccggagctattttcttcccttcactctttccgtctcc
aggctgatgaccatggttatggtgtttcttatatcttcatgggggatggcatgatcacct

Exon 19 +      23023      23115   0   Internal     93   100   Excellent
tctgtttgacgtccacaattacccggactatgtttcctcaggcggtggattcgggcctgt
gagtggagctgggcgcgctggcccccagaggaaagagggggctggggggcctgcactcct
gcatagtgggggtggaggggaccggagctattttcttcccttcactctttccgtctccag
GCTGATGACCATGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTC
CACATCTCCAGCAAAAAATCAAGCACAAAAACG
gtgagacaaacgtgtatacccaccaactccctctttcctcaggaaccaggagtctgggcc
cccagcccctcctccctcagacccaggattccaggccccagcccctcctccctcagaccc
aggagtccaggcccccagcccctcctccctcagacccgggagtccaggcccccagcccct

Exon 20 +      23471      23565   0   Internal     95    53    Marginal
cccctcctccctcagacccgggagtccaggcccccagcccctcctccctcagactcggga
gtccaggccccagctcctcctccctcagactcaggaatccaggcccttagccctcttgtt
tctcagcctccaggatcccatctcccagcttcccctggctctgacctgttctccttccag
GATTCCCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTC
CAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGG
gtcagggaaggagaactccaggcacaggtgtggatttctctcccgccagactggggcctc
caaggcctcaatgacatccaccgacttctgactccttccagcaggcagctggcctctcca
aggaataagggtgaaattgccacagctggctgacacaggacaggggcaactggtttggca

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