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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (6586 bp)
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PERCEVAL Exon Candidates (5 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1217       1274   0    Initial     58    95   Excellent
tcagtgcagaatgtagggggagcccaggctggcccagggagcagttggcggtggaggcct
tgggcaatttcccgtgttcccactgagtggggctgtccctgggcctgggcggggacgcca
ccaactgccaaggcctgtgtataagggcagccgccgccttagccacagacctgccccgcc
ATGACCCGGCTGACAGTCCTGGCCCTGCTGGCTGGTCTGCTGGCGTCCTCGAGGGCCG
gtgagtgcctctctgtgccggtggtcccccatctgtgctagggcccggctgccagggcag
aactcagacttaaagcacagagaaggcaagcggcttggcctgggtcacacagccagcccg
gcctggacgatcccgcgaaaggcgtgagggcggacggtgtgcgggactcaggggccccct

Exon  2 +       1600       1756   1   Internal    157   100   Excellent
gagggcggacggtgtgcgggactcaggggccccctgtcctcttagggagtgggacgatgg
gggagggtgggtccccccgcagccccactgggtggatagagctgaggctgcagcttcaca
cgccctcccggccactgtgtggattcttggggatctcagagctgtctccccccgacccag
GCTCCAGCCCCCTTTTGGACATCGTTGGCGGCCGGAAGGCGAGGCCCCGCCAGTTCCCGT
TCCTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGGGTGCCCTGATCCATGCCC
GCTTCGTGATGACCGCGGCCAGCTGCTTCCAAAGCCA
gtgaggggtcctggggagggggcctagggggcattggggctcagagaaggggcttggggg
gcttaggcattcagtgggggtgcttggtaggtgaggaggggaggggattgcaaaaggagg
ggctcagggaaaggagggggcttggagagggaaatggggactgagttgaggagggaccca

Exon  3 +       2932       3087   2   Internal    156   100   Excellent
ctcaagatgggaagggggccctggaaagtctcggctctgcttctgtaaaagcgggggagt
tttcagggtgaaggattgcagtctgcaggctgggatcccccctaatttgcaagccggctt
gctctgtgcccaggccccagcctggtgtcctccctctgccctttcctccgctactctcag
GAACCCCGGGGTTAGCACCGTGGTGCTGGGTGCCTATGACCTGAGGCGGCGGGAGAGGCA
GTCCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGAATGGCTACGACCCCCAGCAGAA
CCTGAACGACCTGATGCTGCTTCAGGTGAGAGGATG
gtgccacctgtgatcccagcacctcgggaggccgacgttagccagggaaacaagtccaaa
cttggtctctacaaaaaaatacaaaaattagccgggagtggtggcgcgcacctgtggccc
ctgtgcttcaggaggccgaggcggaaggacggcttgaggtcaggagttcgagaccagcct

Exon  4 +       4078       4311   0   Internal    234   100   Excellent
ccttggcctcgcaacgtgctgggaatacaggcgtgagccaccgcacccggcccctgccgg
gaattaaacgcaaaccacttacagactacagttaatgtcgctgacacttctgctcccagg
ggtccccatgaggctccagtccccagggccaccctcccctgactccatttccttccccag
CTGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGATACTGCCACTGCCTCTGCAGAAC
GCCACGGTGGAAGCCGGCACCAGATGCCAGGTGGCCGGCTGGGGGAGCCAGCGCAGTGGG
GGGCGTCTCTCCCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCCCCGAGGACCAGTGT
CGCCCCAACAACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCATCTGCAAT
gtgagtgctccctgtggcgggaggaggggtcctgagaggtactgagctctccgtggcagg
agaaagcaagtgcaggctgagggcggcacagcaggggggccccaggattgagcattttca
cggtaggagaaacagtatctttttttttttttttgagacagagtctcgctctgtcgccca

Exon  5 +       5086       5247   0   Terminal    162    75        Good
agcaactgatcccaaagtccactagcagttaaccagggcagagaaagagaagagccatgc
aaaggccctggggctggatcaggacttgtaggttccaggggcagcaagaggcctctgcag
ttctggggtggcgtgggagccaggccctgggacgccctgacacagctgctgcctgcccag
GGGGACGGGGGCACCCCCCTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCC
CTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGG
ATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAG
gggggcctgtgacctcccatggagcccagccccgccctccacacctccggcgctccgcac
ccacctcccacggccccgcccctgcccccgctccggccagaggggccctggctgtaataa
agaagccgatctctcctctgctcctggtttctgttcattggtgggggagggggctgtggg

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