GENSCAN 1.0	Date run: 15-Jan-104	Time: 19:27:37

Sequence NFIC_1 : 98746 bp : 55.82% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1252   1403  152  2  2   88   56    41 0.265   1.29
gggagaccgagggaggaggcggcgaggagagcgcgccggccgcggggcgggggggggggt
tggggggggcgggggggtggtttggaaaaatgactcagtaagttcagcgcgcccgctccg
gccggccctgcgcctcccgccgcgcccgggatgtattcgtccccgctctgcctcacccag
GTACGGTCCTCGCCCGGCCCCCCGCCGGCGCCCCCGCGCCCCCCGCATCCCAGCCCCGGA
GTTTTGAAGCAGGAGGAGGCGGGACGAAAAAGGCGCGCGTCCCTCCCGCCATCCCTGCCC
GGGATGCCCCCCGCGCCGAGGGCTGGGGTCCG
gtggggggatgggtcaggctggggtaccccccccacacccttacctaccgcggaccccct
acgcgggactcccgcccagcacccccaaccccgactctcgggacctctcccggatgtggg
gcttggtctgcagatttgcgtcccccccccacacaccgacgcactccgcacccccgcccc

 1.02 Intr +   2088   2261  174  2  0  118   20    41 0.122   0.95
accgtcccggtattttcgctgcatcgattctggattctggattctggattctggagccgc
cgccgggaggagcgggaggcccggcgctccgggtctggcccgggcactgcggcgctgcgg
acgccctcgccagcccggcacctgccccgtcccctccccctccccctccccctcccgtag
CCTCTCACCCCTGGCCGCACTCCCAGACTGCCCCGGGGCCGAGCCTTGTGCAATGGCCGA
GGGGGTGTGTGGGGAGGGGGCGGCTCCCCCCGGGGACTCCTTCCAGCCCAGGCTCCCGGG
GACCCCGAGGTCTGCAAGTTCCGTTTTCTAGACCGCTGCTTTCCTCCTTACGCA
gtgtgtctttaggctggagaggttctggcctcagtttcccctgaagtgaggtgcggctaa
ggccggttctggagaggggacagtatggcgggcaaactgtaaagtcccggcacgtggggg
gtgcgattccagcgagggccaggcccgtcttaagaagcactgtgtggggagtatatgagt

 1.03 Term +  16207  16947  741  0  0   73   54  1564 0.492 145.41
tttgtgcctctcacatagtccaagtctgtttgctcatctgggcgatgggttcttgcaggt
ccctgataaacttctcctgggtcccccgggccttttgcgtgcctccggcggcgtgcacgg
gtccgcagcgaccccctgcccacctctgcccagcccctcccactctgcgggtctgttcag
GGCCCCTCCGACCTCAGCCTTCGGGGCCGGGCAGTGGGTCCGCCCTCTGCGTCCCTGGCG
CTCCTGACCTCTCGCCTCTCCGGCCTGCAGGATGAGTTCCACCCGTTCATCGAGGCCCTG
CTGCCTCACGTCCGCGCCTTCGCCTACACCTGGTTCAACCTGCAGGCGCGGAAGCGCAAG
TACTTCAAGAAGCACGAGAAGCGGATGTCGAAGGACGAGGAGCGTGCGGTCAAGGACGAG
CTGCTGGGCGAGAAGCCCGAGGTCAAGCAGAAGTGGGCGTCGCGGCTGCTGGCCAAGCTG
CGCAAGGACATCCGGCCCGAGTGCCGCGAGGACTTCGTGCTGAGCATCACCGGCAAGAAG
GCGCCGGGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATGCGGCGCATCGACTGT
CTCCGGCAGGCGGACAAGGTGTGGCGGCTGGACCTGGTCATGGTCATCCTGTTCAAGGGC
ATCCCGCTGGAGAGCACCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGGTCACCCG
GTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTG
GCCTACTTCGTGCGTGAGCGAGGTGAGGTGTGGTGGCCTGAGCGGAGCGGCCAGCGGGGA
GGGTGTCTGATGGTGGTGACACGGGGCCAGGAGGGCCTGAGGGAGGAGGCCAGTGCGTGT
GGGTATGATGTGGTGGTCTGA
gaggggaagtgggccttggagagtgcccaatgggggcgacacggggcacggagcatctga
gggaggaggctggtgggtatagatgtgatgtggtggtctgagaggggaggcgagtctagg
agaatatgtaaagtaggtgatatggcacaaggagagtctgagagaggaggccagtgcata

 2.01 Init +  26504  26564   61  1  1   61   92    69 0.671   6.26
gtgagctgagattgcaccactgccctccagcctgggcaacagagtgagactccgtttcaa
aaaaaaatgttatatatgtaacaatgtaataattagtaatatgtcatatataatcatgga
acaataaataagaaaaatagtgtctgcggtgacagcacagtagttattattgtcgttatc
ATGATCGTCATCACTGTGGTTCTCGTCCAGCTCTGCCCTGCAGACAGCTGTGTAACCCTG
G
gtgagtttcttgccagctctgtgctttactgcctcatctgtgaattgagcatagggggtg
cctagcaatttaaatgagataatagctcttttttttttttttttttttttgagatggagt
cttgctctgtctcccaggcaggagtgcagtggtgtgatcgtggctcactgcaacctccac

 2.02 Term +  33080  33528  449  0  2   74   38   113 0.353   0.66
gcgcacttattgagcgccagctgcataccaggccttgctgaggaagcctcactgcagagg
ttgcagtgagctgagaggcaaaggccacccagcctggatctcactctggtgtcatcgcct
cctccctctgctcagggttgtgcagcttcaggctgctcccctgccctctctgggcctcag
TTTCACCTTCAGAGCAACGGGAACAGCCCCATCCTTTCACACACTGGAAACCATCACCTT
CTTCTGCCTGGGAGGGGGTTGTGCTGTCTCTGGGAATCCCAGGCATCCCCCAGGCAGGAG
TCAACCCAGAGGCCCTCGGACCCGGGCTGTACCCTGTGACAGCTCCGGGTGGCTACGACG
CTCCCGTGCTCCAGGCCAGCCCCACAGACAGCCCGGGACAGGTTGCTGCCGGATGGACAA
GCCTGTGCCTCGCTGCCTTATGTAACCAGTTTATGCAAGGGCAGCCGGCCCGCTTACATA
AGGGGAGGCCGGGCCAGCGCCCAGCTGGGGAGGGGGAGGCTCTTAAAGGGACCGGCGTCC
CCCGCGGCTCCCTCCACGGGCACTGGTGCGAATTCATAGGCGAGCTGCGGACTCCGCCCT
CAGCAAGGCCGCCATTAATGTCGTTATGA
ttatttttgtggatgttgtttatcatcactatattctttccccagggcgggggttcagct
gagcggaggaccacgcccagtgcttgggcagaggcttgggctgtgacgctggctctgggt
gtcacctggttaagtccctgtctctgagcctcagcctccccttctgcacagtggggcaat

 3.01 Init +  36210  36276   67  2  1   49  101    42 0.643   2.80
attcagttgctcacctgggtcgtttataccttatctgaggctggcccttgctctccttgc
cccgtctcctgcctgcaagccgcacctgcctgggcacatgcagggaagggagcggcgcag
cactgggcacgcctgggagctctcctgcaatcaggactttgttagcgggcaagctgggat
ATGGGTCCTGGTGCCCGGGAGGCCCGTGGGGCTCTGGGCTCCTGCCAGGGTCCCAGCCCT
AACCCAG
gtacgccacccacatggcagggttattctctttttttttctctttttttagacagagtct
cgctctgtcacccaggctggagtgcagtggtgcgatctcagctcactacaacctctgcct
cacaggtttaagagattctcctgcctcagcctcctgagtagctgggactacaagtgtgca

 3.02 Term +  39197  39585  389  0  2   70   43   263 0.752  15.47
gggagccctgggtggccgtgcgcgggtgggcgcttggcaaggccgccctgctgttggcac
cacgtgtttaacccctcagaggctgcagaggggctgggggaggcggcccagggcccagtg
gtgccccagaggctcccttgtcaccttctcctggtgtccccccacccccaccccacccag
GAGGGCAGGGCCGGGTGCCCGAGGCCGGTGCCAGCCTGCGCCGCCCAGACCTACAAAATG
GCCGCCAAGGCCGGAGAAACATCTGGAACAGGGGAAGGGAGAGGCGAGAAAATGGCCGCC
AGAGGGATGATGTCATGGGCGGCGTGGCCTCCCAGAGCGTCCCCAGCACGGGGCGAGTCC
CTACGCGCAGGCCTCCGAGCAGGGGCCCTGCGGCCTCCAGGGACCTCCAGACCCGCTGCC
CAGGCCGGACACCCACAAAGAGTGACACCGGGGTCCCCAGGGGTCCCCAGAGGCGGGCCC
GAGACCTGGGGGAGGGCGAGGCCAGCACTGGGCCTCCAGTCCCAACAGCCCGATGCTGGG
GACGGTTCCGGGGCGGTGGTGGCCGCTGA
cctgacccgcaggacaccgaggcgtccaccagcgcccgggagggcccggagccaggccat
ggagccggcgggggccgggtggaaagaaaaaagaaacttttctttgaaagtgattccgaa
gcaggttggctccggcccaggcggcccggcggcaggggagagggagatggaaagtatggg

 4.02 PlyA -  43206  43201    6                               1.05
 4.01 Sngl -  43996  43799  198  1  0   57   48   210 0.860   7.39
 4.00 Prom -  46225  46186   40                              -1.41

 5.01 Init +  59149  59203   55  0  1   86   58    23 0.928  -1.50
tatgttgctcaggctggcctccaactccagtcgcccagactggactgcagtggtgcaatc
ctggctcactgcaacctccgcctccgaggctaaagcgattctcctgtctcagtctcccaa
gtagctgggattacaggtacgcatcaccacacctggctagtttttgtacttttagtagag
ATGGGGTTTCACCATGTTGGCCAGTCTGGTCTCAAACTCCTGACCCTGACCTCAG
gtgatctgcctcccttggcctcccaaagtgctaggattacaggcgtgagccaccgtgccc
ggcctgaacttcattttacagatgaggctcagagaaggcaagcgacttgctcagggtcgc
acagcaagaaagcggcacagctgggatttgaacatcagtctgttaagattccaggtgtct

 5.02 Intr +  59691  59762   72  1  0  138   92    67 0.966  11.97
gggcagcagccaagggaagggcccaaagagagaccccagggcctgggtgtgttttggggc
cactgtttgtctccatagcactggcccagcccaggactggggccaccagcatcgacactt
catctgctcctggggtggggtctctgtgatgccaccagtgtttcttccctctctttgcag
ATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGATGGGCTCTGACCAGGAGGACAGCAAGC
CCATCACGCTGG
gtgagtctgggggcagcgtggcggtgaagggcggagggcgcagccctgtcctcgtctttt
atttgggaatcatttgcttggcaccactcgttttacagatgagcagactgaggctcggag
aggttaaggggcctgtccaggggctaccagggagctgggttggaacccacgactctgagc

 5.03 Intr +  68103  68177   75  1  0  134   64   130 0.992  15.18
acaaggaccccccacggggccttccccatcagactggagctgtcattcccccacagcaca
ggatggacagggggaacgtccaggctcgggccagcccccaggagtccaggcagccctgga
gtgtggggaagggaaacaggcccagctcagcctactgaccccgctgtcttcctgttccag
ACACGACCGACTTCCAGGAGAGCTTTGTCACCTCCGGCGTGTTCAGCGTCACTGAGCTCA
TCCAAGTGTCCCGGA
gtgagtgttcccgtcagccctgagctgggtcttggagaggggagggggccgcagggagga
aggagcccacccccctcaccctactccttgtcctttccagacaaccccctgtgtcactaa
gccaaggttcctagaaagggaggtggccaggcccttcccagagcccaaggtcagggctcc

 5.04 Intr +  68862  68985  124  1  1  118  106   112 0.999  16.15
ccatggccttggtcctctgatccatagaataaaactggtttcagccaccctaggaaccgg
gccaatatgggaagggggtccccctttggactgcacccagtggctttccctacctctcta
aagcaaaccgcagcactgggcactgcttcctgcctcactctcctctgtcaccctctgcag
CACCCGTGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGGGCACCTGG
CATACGACCTGAACCCAGCCAGCACTGGCCTCAGAAGAACGCTGCCCAGCACCTCCTCCA
GTGG
gtaagtacccaggtccccacctctgggcatttcatgaccccattcatcaacccatcccct
ctggcccgagctgactcattcctctccctggaatacctcttttcacgattcacctggcct
gagaaactcctactcatctcatccttcaaaacccagccagccccacgtgcctcttcccct

 5.05 Intr +  69668  69792  125  2  2   66   75   218 0.997  19.03
gacaggttggaacaggcgttcgtagggaacgggctgaacgcccgcggctcccgcgatgtc
tcgcgatactacctccctcgcccccgctcacttaaggaccggaagtagcaaagcccgccg
tcgcgccccccgccccgcgtctccctggtaaccagcctctccccttccctcgcccataag
GAGCAAGCGGCACAAATCGGGCTCGATGGAGGAAGACGTGGACACGAGCCCTGGCGGCGA
TTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGA
AGGAG
gtagggctggtggcgggggcggagccggccttccggtctgagtcaccgtggcgggaacta
cgtcttccggcagccactgcgcgggcgccgcggggcaggaagccggcctggagccgcggg
gcctcctgggaattgtagtcgtcccgagctgcgcttggctggaagtacggtccgggttcg

 5.06 Intr +  83599  83724  126  2  0  140  103   171 0.949  24.96
ctctgagccttcgtttactcctctgtgtaatgggctcacagcctctccccctcaggattc
tggggtaagaggaggcggggtgatgaggcttcctatcccttcggaggctggctttgggga
aggtccagggctcatggggtgtgaccagcctgtgactctctcgtcccatcccctccacag
GCATCTCGTCCCCGGTGAAGAAGACAGAGATGGACAAGTCACCATTCAACAGCCCGTCCC
CCCAGGACTCTCCCCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGTCATCGCCGTGC
ACAGCG
gtaagcgccacgggcccctggcggggaggggcggcgggccctcctatcaggcctctcaca
gccggggaagtcccactggatgtctgaccatgagtcctattgctgtagccttctaggtgg
gcaaaaaaccatagaggtgccgtagtggagagcgcccagggccttgttccagcccggctg

 5.07 Intr +  87067  87251  185  2  2  109  117   188 0.994  23.83
gtgggagtcggggaatttgggtgtcaatgtggtcagtgctgctgggtttttttggtggtt
attgttactaaacgcactgagatgccggcaggaatgacacccacagacacacagtcacac
ggtcacagagcagaccggctggagcccccaagtaacccccgcttcccactgtctccgcag
GGATCGCCCGGAGCCCACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTCCATCCTAC
CCCAGACGGCCTCCACCTACTTCCCCCACACGGCCATCCGCTACCCACCTCATCTCAACC
CCCAGGACCCGCTCAAAGATCTTGTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCTG
GACCG
gtgagttgggcggggcgcattcgggcctctcctggcggctccaggtgacctcccgggggc
cacgtgctcacacgaaggcacaacctctgcttaaaagggtcttgaggacttggctctgaa
gtcccctcctctgtcgtgctgggaggcagctggattgggtcagaattgagatgctttcgg

 5.08 Intr +  88348  88501  154  0  1  113   63    70 0.643   7.16
aggcccctccacctccggccgtcctcagacccaccaaacccgccatggtcacacccgcgc
cctggccccccagcctgccaccccgtccgggccgtgcacagagccgggggcggccggcgc
cagcagcccgaggtagagggggagcccaccccttaaccacgtgtctctctgttcccccag
TTAAATGGAAGTGGTCAGCTCAAAATGCCCAGCCACTGCCTTTCTGCTCAGATGCTGGCA
CCTCCGCCCCCGGGGCTGCCACGGCTGGCGCTCCCCCCTGCCACCAAACCCGCCACCACC
TCCGAGGGAGGAGCCACGTCGCCGACCTCGCCTT
gtaagcacgcgggaagcggtgccctggtggggcggatgtccgcaggggggcctgtcccct
ccccagccccactgccaggtcagaggtcaggcccgaccctgcagggcctggcgagtttgg
tgggtctccggaaaacagcccagtggccacgtggttgggcccatgtagggctgaggcagc

 5.09 Intr +  91135  91220   86  2  2  113   91    15 0.858   4.34
gggcctttcaggggggcccggttcaactgggggtagggcggcaggctcggaggccccagg
cactgggtgcagaggcccggctgtgtgacgcctggcggtggccaccctctctggggccag
ggccgccccggctcccacaacccctcgctaacgggctctcggtctctctcctccctgcag
CCTACTCTCCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGG
ATCCTGCGGGCATTTATCAGGCACAG
gtaggggccgagaggccggctggtggggtgggaggggcagggcagaggggccggcccggg
gggctcagggcgaagagggcctgctgggtcccacgccacacccctggcacaggggcgcca
gcctcccacaccccacctgggcctcgagcccccacctggcctctccctgaggccaaattt

 5.10 Intr +  97394  97592  199  1  1   86   98    84 0.916   8.65
cagggttgcaggaggtggggggtgagcgtgggaagaggtaaaccatgtctgcagcagagt
ctgacccctcgacttctctccctttttctctctccctctttctgtcgccactgggccact
cagtcctggtatctgggatagcaaaggtcttcttccctcgccccttctccatcgtcccag
GAATCCCAGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAAATTAGAGTG
AACAAGAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACA
CACTCAGGAGGAAAAGAAAAAACAAAGGCAGAAGAAGAAGAAGAAGAAATAAAAACCCAC
CCAAGCAAGAAGACAAAAG
gtaaagacgcaacgtttccaactctcgggacgccaaggccgcaggactggagggccaggc
cccgccacccccacgggagacccgggacagggcgtcttcctaagttattcatctcctctc
cgcctgctgctcgggaaggacagacgccggccgcccgcccgcgccccggaggccctggct

Predicted peptide sequence(s):


>NFIC_1|GENSCAN_predicted_peptide_1|355_aa
XTVLARPPAGAPAPPASQPRSFEAGGGGTKKARVPPAIPARDAPRAEGWGPPLTPGRTPR
LPRGRALCNGRGGVWGGGGSPRGLLPAQAPGDPEVCKFRFLDRCFPPYAGPSDLSLRGRA
VGPPSASLALLTSRLSGLQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSK
DEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQ
KGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGV
AVKELDLYLAYFVRERGEVWWPERSGQRGGCLMVVTRGQEGLREEASACGYDVVV

>NFIC_1|GENSCAN_predicted_peptide_2|169_aa
MIVITVVLVQLCPADSCVTLVSPSEQREQPHPFTHWKPSPSSAWEGVVLSLGIPGIPQAG
VNPEALGPGLYPVTAPGGYDAPVLQASPTDSPGQVAAGWTSLCLAALCNQFMQGQPARLH
KGRPGQRPAGEGEALKGTGVPRGSLHGHWCEFIGELRTPPSARPPLMSL

>NFIC_1|GENSCAN_predicted_peptide_3|151_aa
MGPGAREARGALGSCQGPSPNPGGQGRVPEAGASLRRPDLQNGRQGRRNIWNRGRERREN
GRQRDDVMGGVASQSVPSTGRVPTRRPPSRGPAASRDLQTRCPGRTPTKSDTGVPRGPQR
RARDLGEGEASTGPPVPTARCWGRFRGGGGR

>NFIC_1|GENSCAN_predicted_peptide_4|65_aa
MKLAEGRMALGAALEGGLRQNLSEDVTVALQREKEPSHVESWGESVPQRFGDKGKVHGAG
MKLDV

>NFIC_1|GENSCAN_predicted_peptide_5|401_aa
MGFHHVGQSGLKLLTLTSDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVT
ELIQVSRTPVVTGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEE
DVDTSPGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSF
TQHHRPVIAVHSGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDL
VSLACDPASQQPGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGAT
SPTSPSYSPPDTSPANRSFVGLGPRDPAGIYQAQESQGAAQPAPGPRFRWKIRVNKNTPA
DSQPGQKDKTHRRTHSGGKEKTKAEEEEEEIKTHPSKKTKX