GENSCAN 1.0	Date run: 15-Jan-104	Time: 17:09:41

Sequence PSTPIP2_1 : 91120 bp : 42.95% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    456    451    6                               1.05
 1.03 Term -   1181    925  257  0  2   89   36   231 0.758  12.76
 1.02 Intr -   1608   1533   76  0  1  112   64    24 0.655   0.57
 1.01 Init -   1910   1698  213  2  0   92   -9   176 0.612   7.12
 1.00 Prom -   8266   8227   40                              -6.05

 2.02 PlyA -   9328   9323    6                               1.05
 2.01 Sngl -  12055  11855  201  1  0   71   36   182 0.835   6.23
 2.00 Prom -  12527  12488   40                              -5.65

 3.01 Init +  27070  27164   95  0  2   71   20   139 0.061   5.30
tgcattccaagtcacttggaaggtgtatagaagggtagagactgccatgccccactccag
gttcagaattagcagggctggggtgggactgaggggtctgcatgtttaacaagctgcctg
agtgattctagcctgctgatccctggagcccatgtctatagaggctgtatagcagacatc
ATGAGAGGAACGGGCTGGAGATGCAGCACAGAACTAGATGTGCGGATGCTCAGCAGCGGG
ACCCGTAACCCTGTTGGTGGCTTTGGAGACTGCGG
gtgctgtttgcttcccctctgctccttacgcttctgcccagaggccataggaggatagaa
gaggtgaaaaggagcatagaaataagttctcagaggccctgcagcatggaatgagtagag
gcttttccccccaccaagtttatgcagttattccagagccatttgttggaaagattacca

 3.02 Intr +  30372  30628  257  0  2   63  103   100 0.057   5.16
ggcacaccaccatacttggcttttttttttttttttttttttaaggagaggtgaggtttc
gctatgttgcccaggctggtcttgaacttctgagctcaagcgatcctcccgcctcggcct
cccaaagtgctgggattacaggcatgagccaccacacctggcccctttttcttaattaag
GATGAGGAAACTCTTTGAGTGGGACTGCACGGGTGGAACTAGGCCAGAGTTTCCTGGAAA
CACAAACCAAAACCACAGACCTCCCAGCTGCCAGCCTTTAAAAAACCCAGAATTGCTGCT
TCAGAGGAGTGGCTGGACTACAGAGGCAACCAAGAAAGGAAATACCCAGGAGAAAACAAA
GAGTGCTGAAGGCCAAGTTAAAGTGGTGGAGGACTTGTCTGGAAACTCCTGTGTATGTTA
CTCAGAGAACACAGGTG
gtaagttgactgacaaaaataagaataggagggccaagaaaaagggctgcacgatgcacc
aagacatcctccagtgtctttctctgggaagggcaaagactcctgtctacaaaccggttt
tgacactgaccatttggtacccattcattcatcactcaggaatctgttttcattgttctc

 3.03 Intr +  32739  32934  196  1  1   70   87    19 0.426  -2.45
ctcctggcctgaatttgggcttcagtagaggatccatagagggacctcagcctagccagc
tccctcatccacgtgcctgtgatttgtctgtcacttcctgttttgtggcccttcagtctc
atcaattaaaaaactctttcacactacatgtgttcttacttcttccattgttcttcttag
CTACCTGTGTCTTGGAGGTAAAGTGTTACCCTACTGAACTTGGGTCTGCTCACTGGGCAC
AGCAAAGCCCAACACTGACACAAATGTTTGCAGTTACAGAAAGAAAGGCATTTATTGCAG
GGCACCAAGCAAGGAAAAGGGGCATGATGGCTTACAAGCAAGGGTTTTTAAAGGCAGGAA
TGAGGGGGTTTCCAAA
gtgagttaggggcttaggaatttgtggaacttccttatccattttctggttccagtctgt
cgaaggtcaacatgactgtgatcagcatttgttatcaggtgagagtcctggtttctgaaa
aacaactcaaggatgtatgtaaagatgttatctttgtttctatagggaaccaaacatctt

 3.04 Intr +  33244  33298   55  1  1   86   87    27 0.536   0.46
aggatgtatgtaaagatgttatctttgtttctatagggaaccaaacatcttgtgaccctg
acttacttgggtggcttggttggtggattattcattcacatccctaatttctggttgcag
ggctagctagatacctggaattttccttgaaggaactgaaacatgttctttcatctccag
GGTGGGGGTGGAGAAGCCTGACAGGCTCCTAAGTGGGTCCCTGCGCCATCTCAAA
gtgagtcagcaacgttccgtggccagcttcccacctcttttgtcttatcttctctccggc
cttgggggctgccttctgttcctggtctgatgccatgttgtctttcccccagagtgcaga
catcctcagcaccatcggctatgacaacattatccaacatctgaacaatggccgcaagaa

 3.05 Intr +  33411  33511  101  2  2  107  102   139 0.843  15.19
ctttcatctccagggtgggggtggagaagcctgacaggctcctaagtgggtccctgcgcc
atctcaaagtgagtcagcaacgttccgtggccagcttcccacctcttttgtcttatcttc
tctccggccttgggggctgccttctgttcctggtctgatgccatgttgtctttcccccag
AGTGCAGACATCCTCAGCACCATCGGCTATGACAACATTATCCAACATCTGAACAATGGC
CGCAAGAACTGCAAAGAGTTTGAAGACTTTCTAAAAGAAAG
gtacgatgatgctctgtcctctctgaagagggtgggccaagatgtctccacacagacaag
gaacaatttcctttttttcatttgtgtttaatggttctgaagaccctctctctgctctag
gttatggaatgatacctgagaagtacatgatacttctgtcctaaagttcttagaaacaag

 3.06 Term +  33632  33650   19  2  1  107   54    24 0.520  -2.29
ccaacatctgaacaatggccgcaagaactgcaaagagtttgaagactttctaaaagaaag
gtacgatgatgctctgtcctctctgaagagggtgggccaagatgtctccacacagacaag
gaacaatttcctttttttcatttgtgtttaatggttctgaagaccctctctctgctctag
GTTATGGAATGATACCTGA
gaagtacatgatacttctgtcctaaagttcttagaaacaagtttgacacataagatttat
gatgaaactgcgaacgaattatagtaagaaaagaaatacacttagtactgtggtacaaat
aacattgaaagaccccatgatgtagcttttagactgctgaggaagagactgctgaggatt

 4.06 PlyA -  36463  36458    6                               1.05
 4.05 Term -  45186  44746  441  0  0  -55   40   740 0.952  49.17
 4.04 Intr -  53241  53127  115  2  1  120   29     8 0.087  -2.37
 4.03 Intr -  56783  56652  132  1  0   58   96    95 0.317   6.14
 4.02 Intr -  63193  63047  147  0  0   52   56    85 0.083   0.13
 4.01 Init -  64689  64568  122  0  2   49   84    56 0.074   1.01
 4.00 Prom -  69329  69290   40                              -3.85

 5.01 Init +  73915  74022  108  0  0   51   75   220 0.983  17.27
gagagagagagtgagctttcaaagactgataagaaaaagcatctgccctctgggagccca
tggcttagtgacaatcagagcactaatcagacggccctgtccatgctggacttcctgggc
caagggggctgcatttcatggttacactctgttcatttgttttggttctctttgttcata
ATGACAAAGGCAAAGAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAG
GCCGTCAGCCGGAGTGCCAACCTGGTGAACCCGAAGCAACAAGAAAAG
gtacccaggagggctaacaacccgaaaaatctgagactgacctatgtcaggctaaagcca
attatgaatcttcataagaaatgaacctgtatcctaaacccctggaaatatcttccttca
tgtattgggggtcttctgaacctgaaaaaccactgccacatatttgggggttaggggaag

 5.02 Intr +  74619  74664   46  2  1   92   94    57 0.494   3.76
ccaagattgataagattgcagggcacgttgaatgatttgctcatgagggaaatgtacaca
ggacttgcactagacctggtctcttcatagttactgcttttcaatctgttttgcctgtgg
aagcctcgtccagcattcccaatgcttgctctttttttgtttgtttgtttgttttcacag
CTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAG
gtgagggggcagttcctacggatgggggagggttgctggtggggtttacgttatcctaaa
tgtgtccctgagaaagggagttttatataccttaaagagagaatatatggatattcagca
ggattagtgagatatctgaagggaaaaagggaggaaggaagggagagagtaaggaaggga

 5.03 Intr +  75630  75745  116  1  2  107   55   145 0.921  12.35
ttcaccaaatatgatgagggtgagagatgcaataactcccagtgctcagagtcctggggg
ccttgtaagctcagcacaactcggatgagtttcttttgccatctgagaccagcctgtggg
tgtatctgcgagccaccttcctgtctagtttctgacccaggtctctcccttctgttgcag
ACAAAGCATACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTG
AGCACATCAAGGCCTGCGAGGTACCCGTAACCGGAAGCTGCTCAGGACTGGGGTGG
gtgggtgggggtgtgtgtaacaggaagctgctcaggacgggggggggaggggaggagggg
gaggggagggagggaagggggagtggggccgggggttgggggaggacgagggggcgggag
gtgggtcttctgcccagaacctggagagtctacttttgtagaaatgatctgcccggattc

 5.04 Intr +  79755  79853   99  2  0   45  100   120 0.812   8.29
tgtttgcattctttgtgatatgagtttatgagtttcctcagtggtgggggagaagcattc
taaattggacaataagtttacagataactgaaggttgacactgtttcttaagtcacagct
agccaaaatgaatggtccttttccttgcatatctatgtacacgtagctatttttctgtag
GCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACAT
GTGAATCAGCTGTCACAACAATGTGTCACCAGTGATGAA
gtaagtcagaggcatccactgaggattgtcgtgtgcatgttggatacattagagtagaag
gaactatagatattgattggttcactttgcccttggtgaagtaaggtgacttgcctaagg
ccatacagtgagttgacagaaggatgcagataacatgtaacctgactcctggctcatttg

 5.05 Intr +  81256  81352   97  0  1   56   68   122 0.585   5.66
cactatgttggccaggctggtctcgaactcctgaccttgtgatccgcccaccccaacctc
ccaaaatgctgggattacagacatgagccactgcgccccgcctcaaacccatgtttttaa
ggagctgtgtcacaatgatctcaacatacctctacctattaattgacctttttttattag
ATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCAGCATTCAGAGGGACATTGAATAC
TTTGTGAATCAACGCAAAACTGGACAGATTCCACCAG
gtgaatggggcagtggggtggggagtgttatttacacaattctattagcctttcttgtta
gatgtcattaaggatgaaagacgcctgcctcttcatgtcctgtttcttggtgactctcct
agcacccatcatgtatgagaatttctactcctcccagaagaatgcagtcccagcaggaaa

 5.06 Term +  84699  84748   50  1  2  116   38    23 0.139  -3.41
agaatgtcctctggtttggagtcgtgactaccatttatagtttttgttggcagatctatt
ttctctttacaaaaggatagacaccagaatctgtaagtgaaatgccctggcttgaaaagg
gtgagatcttattatgaaaaattgatgttactgttgttttctgtgttctgccttttgcag
ATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATCAGTAA
aatcaatggtaagaacctttatttttcacataattgagtcatgtgtagactggtaattgt
gctattgaagcctttgaaccttatttataacactaccacaaactagcaaggccttgcatg
aggcaggtacactggccagcatgctgtcccttcaggacacctctgtggatcccacagctg

Predicted peptide sequence(s):


>PSTPIP2_1|GENSCAN_predicted_peptide_1|181_aa
MAWGGGSGNKAVEQGKLQQREALYAVRFLERTIPGGSCCCQPGKAHKPPHQIPPDPLTAQ
LQGPAETLPGREHALLGARAAEGGPWSPSPRDSRARDSTSAFHTRAGKPPPGPKPLPIAT
AAVGALRSLRETWAGPSALTRPGAAARTRTQAHLKPHSVGPRSIYQPEASCLLLEVFGYW
K

>PSTPIP2_1|GENSCAN_predicted_peptide_2|66_aa
MEIRRTWQEHQGPLSTNFLPMLPREKQYQSVSARERPASQDSGSGLWLVTVKVNHSYGQE
LDKNAD

>PSTPIP2_1|GENSCAN_predicted_peptide_3|240_aa
MRGTGWRCSTELDVRMLSSGTRNPVGGFGDCGMRKLFEWDCTGGTRPEFPGNTNQNHRPP
SCQPLKNPELLLQRSGWTTEATKKGNTQEKTKSAEGQVKVVEDLSGNSCVCYSENTGATC
VLEVKCYPTELGSAHWAQQSPTLTQMFAVTERKAFIAGHQARKRGMMAYKQGFLKAGMRG
FPKVGVEKPDRLLSGSLRHLKSADILSTIGYDNIIQHLNNGRKNCKEFEDFLKERLWNDT

>PSTPIP2_1|GENSCAN_predicted_peptide_4|318_aa
MCCHCHATDSYGLGKKPHDPQVSIPLRMAPKTPPYPANPLGQQAQAQDKERFPKGPPGRV
KEVTKSHAELCRETWLDIFGCQIEKSLSPISVDCQSEYGLAGSCAWSITGCNQGIAHAAF
SSGGLTEEESAYSSVLPHCGKGNYSTTLLKSTLALSPNRFHYRFESLRVANENRSEAEAL
ARNEGGLESRSGAERAAPKGCRFIPAKTAGQAKRGEGRGETAPAAEPPDAGEDKPAVEWC
LEELVFGDVEDDEDTLLRRLRGPWVQGHEDLGDSEAENEAKGNCAPQKKPIWVDEEDEDE
EMVDMMNNRFRKDNDEKC

>PSTPIP2_1|GENSCAN_predicted_peptide_5|171_aa
MTKAKKNYEQKCRDKDEAEQAVSRSANLVNPKQQEKLFVKLATSKTAVEDSDKAYMLHIG
TLDKVREEWQSEHIKACEVPVTGSCSGLGWAFEAQECERINFFRNALWLHVNQLSQQCVT
SDEMYEQVRKSLEMCSIQRDIEYFVNQRKTGQIPPDDPNYSLVDDYSLLYQ