Gene SHMT1 Variant 2
DNA : 35.67 KbNT_010718
mRNA : 2518 bp NM_004169
CDS : 1452 bp NP_004160
NON CODANT MRNA CDS initiator and stop codon genomic and intronic adjacent sequences allelic variation
EXON 1  171 bp
gtcagttctgcaggtccctgccccaggtgcgcagctgcactacgcggcctccggcccgcc
ccggagaaacaggccctgcccgccgctgcgccgcagccaatagcgcgggtgcgtttggtg
gcggcccatgcttggctgcgctctctgattgggcgcctccgggggcggggccaagcccaa
GCCTGGCGCGCAGAGTGCACCTTCCTGAGCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTT
GGGGTTGGAGCGGCTGGTCACGTGGCTGGCCCGCGGCGGTGCGCGGGGCGTTGGGTCAGC
GGGTCTGGGACTGGTGGCACCGGCGGCGGCGTAGGACGGAGGCGTCGCTAG
gtacgtgcgcgggccgtgttccggtaggtgggcggcttcgggtccgagggccgcggcgtc
ccagagcccggggggtgcttcggcgtcctcgctgtcccccgccgtaccccaccctctgca
gccgcaatgacgggaggggagcgcttgggtcgcgcctgggctggggatcgggcggcggcc
EXON 2  115 bp
gtcagaagattgaggcaggagaatctcttgaacctgggagacggaggttgcagtgagccg
agatcatgccactgcactctagcctgggcaacaaagactacatctcaaaaataaataaaa
aataaataaaataaataaatttaattctggaagctacacatgtttttcccatttttttag
GCAGCTTCGAACCAGTGCAATGACGATGCCAGTCAACGGGGCCCACAAGGATGCTGACCT
GTGGTCCTCACATGACAAGATGCTGGCACAACCCCTCAAAGACAGTGATGTTGAG
gtgagatttttggggtcttcacagatttttttatgttggaggccttcatttaatctttag
ttctaattacaaattaattagggacagccttgaaatgagtattatcctgctggatttaga
ggtggtggcagacaaaatggctacaaatcctttgagggtaaatttaaagattgctgggtt
EXON 3  146 bp
attttgtttttgttaattcattgattagtgctttctcagatactaaaacctttgaggagg
attcattctattccataatgtgaaagagtgtcttttctctttaggaggttgtaatttgga
tcagagcaaaattttaaactaaaatttccaaatatcaagcatctgttttcttctcataag
GTTTACAACATCATTAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGAGCTGATTGCC
TCGGAGAATTTCGCCAGCCGAGCAGTTTTGGAGGCCCTAGGCTCTTGCTTAAATAACAAA
TACTCTGAGGGGTACCCGGGCCAGAG
gtatgtgaatatcttcaaaggcctggttctgacacagtcatagggagtactcagtcagcc
taggacctaaacaatttggaaatttcagaaaacaataagcttcccagctgtaggatttct
gttccacgcctgctctctgacagaactcttttattcccagcatgtgataacactgaagag
EXON 4  116 bp
tccagaggcattggtggaacacttgatcatgctggcttcagcatctgcatgttaacaagc
tcttctcattacttctctccactttagtttcactgtcccacccctaagcttctttggcct
ctgtgaagcacagactttctgggtctgagtggatctaagtctcctgctcttctcccacag
ATACTATGGCGGGACTGAGTTTATTGATGAACTGGAGACCCTCTGTCAGAAGCGAGCCCT
GCAGGCCTATAAGCTGGACCCACAGTGCTGGGGGGTCAACGTCCAGCCCTACTCAG
gtgcttgtctcatccatatggcctggtgcagcctcttcatgtgcatcccccagggccgac
atgcaccaagaagagtcctaagatggactgccatggactgccataggccgggcccagtgg
ctcacgcctgtaatcccagcactttgggaggcggaggcaggcagaccacctgaggccggc
EXON 5  161 bp
tgccctctctctgaacttcacctctcaaggctggtggtgaaggggcacctcctggagctc
agggaaggtacaaggcctgttctcgccactcctgggtgaaggcttagtggccaaggtccc
ggatgccacttggtacctcagttagaaataatcatgtctcctctggtccactcgtttcag
GCTCCCCTGCAAACTTTGCTGTGTACACTGCCCTGGTGGAACCCCATGGGCGCATCATGG
GCCTGGACCTTCCGGATGGGGGCCACCTGACCCATGGGTTCATGACAGACAAGAAGAAAA
TCTCTGCCACGTCCATCTTCTTTGAATCTATGCCCTACAAG
gtaagcatgtgtttctctcctagcttttatttccttgggaaacctctgatgcttggctgt
gcctgcaggggtaagtttggtttatgtgtcactacaggaagtccccacctcgcaccgttt
ttaatttccttgcagcggggactcctcaggttttcaggacccgctggggcagctgggatg
EXON 6  82 bp
tgtgagccatacttggttgagcaggctgaacacaccagtatccatcctgtctcaccctca
agtcctcatctaggacatcattcctcttgtcatggtgggtggagccagttcaagtgggag
gacaggaggcaggtgtggttggaggaagcagcctgaacctgcctccctgacattccacag
GTGAACCCAGATACTGGCTACATCAACTATGACCAGCTGGAGGAGAACGCACGCCTCTTC
CACCCGAAGCTGATCATCGCAG
gtgatgcgcggggcggaaagtcaccttgttcaccagtagcctggtgcctcttacagaatg
aggatggaaagatgttcgcaccctgttgagcccactgctagtttctgccctggataactg
agtttctggggtctacatatattagtttctttcaggatacagatgtgtgtttgctgcttt
EXON 7  213 bp
gttagagtggttgcctttagcacagaggtgctttttgagggcattctccatttttgctct
gagactttaagggaagaaatctctgggctttcagatctgcacatctagaggccactgtga
agccaactcagctggccggtggacatctctgatgcagctgtgtcacctttcctgtctcag
GAACCAGCTGCTACTCCCGAAACCTGGAATATGCCCGGCTACGGAAGATTGCAGATGAGA
ACGGGGCGTATCTCATGGCGGACATGGCTCACATCAGCGGGCTGGTGGCGGCTGGCGTGG
TGCCCTCCCCATTTGAACACTGCCATGTGGTGACCACCACCACTCACAAGACCCTGCGAG
GCTGCCGAGCTGGCATGATCTTCTACAGGAAAG
gtgagctcccgaatgttgggtacagatgggtaccatggtttacatttctcctgtgggggt
tcagattcagttgagggagctgggaaaaactctgacctgggatccttggaaaatattaag
atcccagtcccttaaagagctgcttaggaaggagcagtgacaggctttacagaaaggatt
EXON 8  117 bp
ctggtctgccctcaggaggcaagggtcccctctgctccgctgtgttacaaatcagttctc
catgccaggataaaggccaggcttgtgcttgattcttccctggccagtctgggtttgagc
ctaaaaagaaaaagaggggacagcccctatgatcccactgtgatgtttttcttcctccag
GAGTGAAAAGTGTGGATCCCAAGACTGGCAAAGAGATTCTGTACAACCTGGAGTCTCTTA
TCAATTCTGCTGTGTTCCCTGGCCTGCAGGGAGGTCCCCACAACCACGCCATTGCTG
gtaaaacatcatctgcctctgctcatcctgtagcccctaattcccatcccacctgtcctc
caaaatcgtgtgccaggacttccacgctggggaaaaagctggagggctgtctctgtgcag
gagatgctaacacagagtagggcatggttgagactggcctaaggtagggacagtagggaa
EXON 9  123 bp
taataaataataaaaaatttttaaaaatatatcattttggaggaaaagataatccaacgc
aaaagcaaggggtgacattgaaaagcaaggaagcttgagtaaaaacaggaatgttgtttg
actcatcatctgtgtatgattctatcctagcctcctgacccattgtctcttcttgtccag
GGGTTGCTGTGGCACTGAAGCAAGCTATGACTCTGGAATTTAAAGTTTATCAACACCAGG
TGGTGGCCAACTGCAGGGCTCTGTCTGAGGCCCTGACGGAGCTGGGCTACAAAATAGTCA
CAG
gtagagacacagatggtgttcagcaggcctgttcttgtggttgtattaaggcttgcttct
cagtttgtgcaaccaggatgtggcccaggctctgctgctgcagctgcaatgatgggccca
ccttgggaggaggtcagcctcgcctccaactggaaagcctccccctgcctcagaccagcc
EXON 10  117 bp
tttcacattcttaggcacgggcatctctcgtggggattagaatcccaggccatgtggtgg
gggtgctcaccttcctgacctcatctgctttgactgccttcatcctcgccttcgtttctc
agagattccttcacggcatagaattcgcctgcatttctacatgtccaactttgtttccag
GTGGTTCTGACAACCATTTGATCCTTGTGGATCTCCGTTCCAAAGGCACAGATGGTGGAA
GGGCTGAGAAGGTGCTAGAAGCCTGTTCTATTGCCTGCAACAAGAACACCTGTCCAG
gtgagaatcatccttgccttctccttcactcctctcccatctgcatttcttctggccaaa
gttgtagctgatgaatatattggctccggggacagacctcacataaaaactgtagtgggg
gctgggcacggtggctcacgcctgtaatcccggcactttgggaggccgaggcaggcggat
EXON 11  111 bp
cgtggttgtgcctccttgtgccttgggttctactttagtttctgaatcagttgtactcct
tgctagggacagccagtatcctcaggccagttctcttttgcccacatgtccctttttaaa
tgcaccaccatcacagtggtgacaatgtgacttagggacagagccccgtttatcttgtag
GTGACAGAAGCGCTCTGCGGCCCAGTGGACTGCGGCTGGGGACCCCAGCACTGACGTCCC
GTGGACTTTTGGAAAAAGACTTCCAAAAAGTAGCCCACTTTATTCACAGAG
gtaaggataaaagtttggaagttgccacatcttattgtgtgtatttagtttctgattgtg
atgagtagctgagaccctgccactgaaagacaattctgcaccaaggctgagtgttggggt
gggagacagcaaaaaacacatgtaaatcaccttgtctgagagggttataaatttgggctg
EXON 12  1046 bp
tgcccaggacatctgtccaagggtgggtgcatctcagagtaattgaggtaagcatggaga
ccttgtgccctgccacactccccagctgggggacattctgacatttgtgcctcggccccc
agccattgtaccccctttggtgtgtagtgtggggtgactcatttgtgtcttgtggcacag
GGATAGAGCTGACCCTGCAGATCCAGAGCGACACTGGTGTCAGAGCCACCCTGAAAGAGT
TCAAGGAGAGACTGGCAGGGGATAAGTACCAGGCGGCCGTGCAGGCTCTCCGGGAGGAGG
TTGAGAGCTTCGCCTCTCTCTTCCCTCTGCCTGGCCTGCCTGACTTCTAAAGGAGCGGGC
CCACTCTGGACCCACCTGGCGCCACAGAGGAAGCTGCCTGCCGGAGGACCCCCACCTGAG
AGATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTTCT
TTTGGACTTTTTTCATGTTTTCTTCACAAATCAAAATTTGTTTAAGTCTCATTGTTAGTA
ATTCTGGGACAGGTTATTAAAGGATTTAAATTTGAACCTGGCTTTCTCACAGCTGGACAT
AATTCTAGGAAAATAAAATACTATGTCGCCACTTGGTCATAATCATTTAGATGGTGGTGT
AGGGCAAAGCTGTTAGAAAGATTGTAGCGTTTTACTCTCCCTGGGCTTTCCTCCGCCTTG
CTGCAACAGAGAGGAAATGCCCATGTCCACAGCTTGTACACACTGCCCCCTCACTATCTT
GTTATCCAGTGGCATGCCAAAGGAGAACTGAATTAGCTTCTGAGGCTTCTGCTGTAAATC
AGAAGTGTATGTTAGTCAAGAGTAAACAAGATGCACCCAGTATGGTGGGAGGGTTTTGCT
GTCAGTAGCTCAAAGTATGGTGTAGAAATGGCCTCCTCCCTCCATCCTGGGAAGTCCCAG
TCCCATCCTGGTGTGAGAATCAACCAGGCTTTCCTGCTCCACCTGAGATAACCAACTCCC
TCCCGTAATCAGGAAGCCAAATGTCACCTTCCCAAAGAAATTTTATTTTCACGTAGCTGA
AGTGCAAAACATAGATGACCATTTTTAATAAGCACAATCAAATTTTTAACCACAGAATGT
CTACAAGAATTATAGCTTTAAAAAATACAACCAATTTTTATATTTCAAAAATATTTGAAC
TCAAATAAATTAATTTCTTAAAAAGT
acacttctcatactatgtgtttggcattgactctggttaactcttgtgcagcaacaccta
cgagatgctatcacacacgcgccagctgcactcctgcaccagccgctgcaacgactgcac
ctcacgtggtggcggggactcacattcacaagacgggacgggaacatgcagtaataaaat