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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (12828 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1250       1360   0    Initial    111    86        Good
gagccacgcggcgggaggactacaactcccggcacaccccgcgccgccccgcctctactc
ccagaaggccgcggggggtggaccgcctaagagggcgtgcgctcccgacatgccccgcgg
cgcgccattaaccgccagatttgaatcgcgggacccgttggcagaggtggcggcggcggc
ATGGGTGCCCCGACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTCT
ACATTCAAGAACTGGCCCTTCTTGGAGGGCTGCGCCTGCACCCCGGAGCGG
gtgagactgcccggcctcctggggtcccccacgcccgccttgccctgtccctagcgaggc
cactgtgactgggcctcgggggtacaagccgccctcccctccccgtcctgtccccagcga
ggccactgtggctgggccccttgggtccaggccggcctcccctccctgctttgtccccat

Exon  2 +       1613       1722   0   Internal    110   100   Excellent
gcctcgggggtacaagccgccctcccctccccgtcctgtccccagcgaggccactgtggc
tgggccccttgggtccaggccggcctcccctccctgctttgtccccatcgaggcctttgt
ggctgggcctcggggttccgggctgccacgtccactcacgagctgtgctgtcccttgcag
ATGGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT
TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCAT
gtaagtcttctctggccagcctcgatgggctttgttttgaactgagttgtcaaaagattt
gagttgcaaagacacttagtatgggagggttgctttccaccctcattgcttcttaaacag
ctgttgtgaacggatacctctctatatgctggtgccttggtgatgcttacaacctaatta

Exon  3 +      10398      10487   0   Terminal     90    94   Excellent
gggagttgagctgaatcaggatgtttgtcccaggtagctgggaatctgcctagcccagtg
cccagtttatttaggtgctctctcagtgttccctgattgttttttcctttgtcatcttat
ctacaggatgtgactgggaagctctggtttcagtgtcatgtgtctattctttatttccag
GCAAAGGAAACCAACAATAAGAAGAAAGAATTTGAGGAAACTGCGGAGAAAGTGCGCCGT
GCCATCGAGCAGCTGGCTGCCATGGATTGA
ggcctctggccggagctgcctggtcccagagtggctgcaccacttccagggtttattccc
tggtgccaccagccttcctgtgggccccttagcaatgtcttaggaaaggagatcaacatt
ttcaaattagatgtttcaactgtgctcttgttttgtcttgaaagtggcaccagaggtgct

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