GENSCAN 1.0 Date run: 15-Jan-104 Time: 14:07:46 Sequence TP53_1 : 21578 bp : 49.95% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Intr + 267 451 185 2 2 22 4 193 0.022 2.89 ggagctgggtcctggtctgaaggacagcagtccggagctaacggttgagtctccaaagtc ttcatactgcagaggaagcacagcggagattagcctcagccaggatggcttcgaagttct cagggatccgacgcagagctaaagaaacccacctgtgcttccctcctcttctgggagtag GCAGAAGACTCCCGGGAGGAGAGGCGAACAGCGGACGCCAATTCTTTTGAAAGCACTGTG TTCCTTAGCACCGCGGGTCGCTACGGGCCTCTTGCTGTCGCGGGATTTCGGTCCACCTTC CGATTGGGCCGCCGCATCCCGGATCAGATTTCGCGGGCGACCCACGGAACCCGCGGAGCC GGGAC gtgaaaggttagaaggtttcccgttcccatcaagccctagggctcctcgtggctgctggg agttgtagtctgaacgcttctatcttggcgagaagcgcctacgctccccctaccgagtcc cgcggtaattcttaaagcacctgcaccgcccccccgccgcctgcagagggcgcagcaggt 1.02 Intr + 12178 12279 102 1 0 83 74 94 0.366 6.79 tgggttgtggtgaaacattggaagagagaatgtgaagcagccattcttttcctgctccac aggaagccgagctgtctcagacactggcatggtgttgggggagggggttccttctctgca ggcccaggtgacccagggttggaagtgtctcatgctggatccccacttttcctcttgcag CAGCCAGACTGCCTTCCGGGTCACTGCCATGGAGGAGCCGCAGTCAGATCCTAGCGTCGA GCCCCCTCTGAGTCAGGAAACATTTTCAGACCTATGGAAACT gtgagtggatccattggaagggcaggcccaccacccccaccccaaccccagccccctagc agagacctgtgggaagcgaaaattccatgggactgactttctgctcttgtctttcagact tcctgaaaacaacgttctggtaaggacaagggttgggctggggacctggagggctgggga 1.03 Intr + 12397 12418 22 1 1 125 95 22 0.983 4.15 gcagtcagatcctagcgtcgagccccctctgagtcaggaaacattttcagacctatggaa actgtgagtggatccattggaagggcaggcccaccacccccaccccaaccccagccccct agcagagacctgtgggaagcgaaaattccatgggactgactttctgctcttgtctttcag ACTTCCTGAAAACAACGTTCTG gtaaggacaagggttgggctggggacctggagggctggggacctggagggctggggggct ggggggctgaggacctggtcctctgactgctcttttcacccatctacagtcccccttgcc gtcccaagcaatggatgatttgatgctgtccccggacgatattgaacaatggttcactga 1.04 Intr + 12528 12806 279 2 0 93 73 164 0.981 13.07 gtgggaagcgaaaattccatgggactgactttctgctcttgtctttcagacttcctgaaa acaacgttctggtaaggacaagggttgggctggggacctggagggctggggacctggagg gctggggggctggggggctgaggacctggtcctctgactgctcttttcacccatctacag TCCCCCTTGCCGTCCCAAGCAATGGATGATTTGATGCTGTCCCCGGACGATATTGAACAA TGGTTCACTGAAGACCCAGGTCCAGATGAAGCTCCCAGAATGCCAGAGGCTGCTCCCCCC GTGGCCCCTGCACCAGCAGCTCCTACACCGGCGGCCCCTGCACCAGCCCCCTCCTGGCCC CTGTCATCTTCTGTCCCTTCCCAGAAAACCTACCAGGGCAGCTACGGTTTCCGTCTGGGC TTCTTGCATTCTGGGACAGCCAAGTCTGTGACTTGCACG gtcagttgccctgaggggctggcttccatgagacttcaatgcctggccgtatccccctgc atttcttttgtttggaactttgggattcctcttcaccctttggcttcctgtcagtgtttt tttatagtttacccacttaatgtgtgatctctgactcctgtcccaaagttgaatattccc 1.05 Intr + 13564 13747 184 0 1 129 89 146 0.939 18.16 atctcaaaaaaaaaaaaaaaaaagaaaagctcctgaggtgtagacgccaactctctctag ctcgctagtgggttgcaggaggtgcttacgcatgtttgtttctttgctgccgtcttccag ttgctttatctgttcacttgtgccctgactttcaactctgtctccttcctcttcctacag TACTCCCCTGCCCTCAACAAGATGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTG TGGGTTGATTCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCATCTACAAGCAG TCACAGCACATGACGGAGGTTGTGAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGC GATG gtgagcagctggggctggagagacgacagggctggttgcccagggtccccaggcctctga ttcctcactgattgctcttaggtctggcccctcctcagcatcttatccgagtggaaggaa atttgcgtgtggagtatttggatgacagaaacacttttcgacatagtgtggtggtgccct 1.06 Intr + 13829 13941 113 0 2 84 25 125 0.883 5.90 gcacccgcgtccgcgccatggccatctacaagcagtcacagcacatgacggaggttgtga ggcgctgcccccaccatgagcgctgctcagatagcgatggtgagcagctggggctggaga gacgacagggctggttgcccagggtccccaggcctctgattcctcactgattgctcttag GTCTGGCCCCTCCTCAGCATCTTATCCGAGTGGAAGGAAATTTGCGTGTGGAGTATTTGG ATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCGCCTGAG gtctggtttgcaactggggtctctgggaggaggggttaagggtggttgtcagtggccctc caggtgagcagtaggggggctttctcctgctgcttatttgacctccctataaccccatga gatgtgcaaagtaaatgggtttaactattgcacagttgaaaaaactgaagcttacagagg 1.07 Intr + 14510 14619 110 1 2 98 71 197 0.999 18.08 aggagaatggcgtgaacctgggcggtggagcttgcagtgagctgagatcacgccactgca ctccagcctgggcgacagagcgagattccatctcaaaaaaaaaaaaaaaaggcctcccct gcttgccacaggtctccccaaggcgcactggcctcatcttgggcctgtgttatctcctag GTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGC GGCATGAACCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAG gtcaggagccacttgccaccctgcacactggcctgctgtgccccagcctctgcttgcctc tgacccctgggcccacctcttaccgatttcttccatactactacccatccacctctcatc acatccccggcggggaatctccttactgctcccactcagttttcttttctctggctttgg 1.08 Intr + 14963 15099 137 2 2 39 99 65 0.861 2.91 cttttctctggctttgggacctcttaacctgtggcttctcctccacctacctggagctgg agcttaggctccagaaaggacaagggtggttgggagtagatggagcctggttttttaaat gggacaggtaggacctgatttccttactgcctcttgcttctcttttcctatcctgagtag TGGTAATCTACTGGGACGGAACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGA CCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCACCACGAGCTGCCCCC AGGGAGCACTAAGCGAG gtaagcaagcaggacaagaagcggtggaggagaccaagggtgcagttatgcctcagattc acttttatcacctttccttgcctctttcctagcactgcccaacaacaccagctcctctcc ccagccaaagaagaaaccactggatggagaatatttcacccttcaggtactaagtcttgg 1.09 Intr + 15192 15265 74 1 2 108 79 56 0.984 5.83 cctgggagagaccggcgcacagaggaagagaatctccgcaagaaaggggagcctcaccac gagctgcccccagggagcactaagcgaggtaagcaagcaggacaagaagcggtggaggag accaagggtgcagttatgcctcagattcacttttatcacctttccttgcctctttcctag CACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAAACCACTGGATGGAGAAT ATTTCACCCTTCAG gtactaagtcttgggacctcttatcaagtggaaagtttccagtctaacactcaaaatgcc gttttcttcttgactgttttacctgcaattggggcatttgccatcagggggcagtgatgc ctcaaagacaatggctcctggttgtagctaactaacttcagaacaccaacttataccata 1.10 Intr + 18085 18191 107 0 2 100 109 67 0.933 9.01 catctcaaaataaataaataaatatttttaaaagtcagctgtataggtacttgaagtgca gtttctactaaatgcatgttgcttttgtaccgtcataaagtcaaacaattgtaacttgaa ccatcttttaactcaggtactgtgtatatacttacttctccccctcctctgttgctgcag ATCCGTGGGCGTGAGCGCTTCGAGATGTTCCGAGAGCTGAATGAGGCCTTGGAACTCAAG GATGCCCAGGCTGGGAAGGAGCCAGGGGGGAGCAGGGCTCACTCCAG gtgagtgacctcagccccttcctggccctactcccctgccttcctaggttggaaagccat aggattccattctcatcctgccttcatggtcaaaggcagctgaccccatctcattgggtc ccagccctgcacagacatttttttagtcttcctccggttgaatcctataaccacattctt 1.11 Term + 19110 19191 82 0 1 119 44 18 0.720 -2.33 aatacacactaatactctgaggtgctcagtaaacatatttgcatggggtgtggccaccat cttgatttgaattcccgttgtcccagccttaggcccttcaaagcattggtcagggaaaag gggcacagaccctctcactcatgtgatgtcatctctcctccctgcttctgtctcctacag CCACCTGAAGTCCAAAAAGGGTCAGTCTACCTCCCGCCATAAAAAACTCATGTTCAAGAC AGAAGGGCCTGACTCAGACTGA cattctccacttcttgttccccactgacagcctcccacccccatctctccctcccctgcc attttgggttttgggtctttgaacccttgcttgcaataggtgtgcgtcagaagcacccag gacttccatttgctttgtcccggggctccactgaacaagttggcctgcactggtgttttg Predicted peptide sequence(s): >TP53_1|GENSCAN_predicted_peptide_1|464_aa AEDSREERRTADANSFESTVFLSTAGRYGPLAVAGFRSTFRLGRRIPDQISRATHGTRGA GTSQTAFRVTAMEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDD IEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGF RLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHM TEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDC TTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENL RKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALE LKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD