GENSCAN 1.0	Date run: 15-Jan-104	Time: 08:52:06

Sequence AVEN_1 : 175275 bp : 39.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1257   1523  267  2  0   64  111   200 0.520  14.94
ccgccccgccccgccccgctccgctgcggccggcctcgatccctagccccgcaccccgcg
cctcgctgctaccgggcgcctttcgctcgcggctcctccgtgcggcccgcttccggtggg
gccagggcgtctccgccgcagctcggctcccgcgcgctcagcaccgccagcggcggccag
ATGCAGGCGGAGCGAGGAGCTCGGGGAGGCCGTGGGCGGCGGCCAGGCCGCGGCCGGCCT
GGCGGAGATCGCCACAGCGAGCGGCCCGGAGCCGCAGCGGCGGTAGCCAGAGGCGGCGGC
GGAGGCGGCGGCGGGGACGGAGGCGGACGCCGGGGCCGTGGCCGTGGCCGGGGCTTCCGC
GGCGCTCGCGGAGGCCGAGGAGGAGGAGGCGCCCCGCGAGGCAGCCGCCGGGAGCCGGGA
GGCTGGGGCGCAGGGGCCAGCGCGCCG
gtaagaggcgacggctggtggggctgggaccgcgtgtaactggggcaagtggggccgagg
ccgccagtcaagagccgcaagagagcgtgccaggcgcgcgccagacgggcggcggcgccg
gcgcctgcgcgggacgggcggatggtggcgcgggggcgcgcctggtggcgggggcgcgcc

 1.02 Term +  11438  11464   27  1  0  135   45    18 0.324  -0.70
tagaggtgaagagttgtggacaaatagtaattgttatttcaaggtagtaaataaatttat
agacaaatgaataactaagatataacctctcaaaaccaagtaagtgttctgctttttgcc
ttactttctctcccaatttttttttttctggcatctgtgtgtttttcctctttctttcag
GTGAAGGTACAATGTGGTGGCCGATGA
tggtggtgtgttttgcagtctaacagactggttagaatcctatcttctcaccccccatgt
gctagttgtaaaatctcaggaaagttactgaaacttcctgagcctcagtttcctcgcctg
tgaaaggtgattaaggatatctaccttacacagctgttgtaaggactgacattagatgaa

 2.04 PlyA -  14251  14246    6                               1.05
 2.03 Term -  16918  16794  125  2  2   57   44    71 0.217  -2.83
 2.02 Intr -  21860  21735  126  0  0   34   89    69 0.308   1.33
 2.01 Init -  22105  21967  139  1  1   53   66   152 0.687   9.85
 2.00 Prom -  22319  22280   40                              -5.05

 3.01 Init +  33233  33256   24  1  0   52   80    54 0.891   0.58
ccttgcctattggaaaagctgcaaaacattaagctactctttctagttgaaaatctcaat
ttgttttaaatggatttgtgtgtgtgtgtcattggacaagataatagctcggcagtagtt
tgattatataataggtcttcagcttattaatctaaatggattcctgttaatctctgaaca
ATGCAACCAGTGACCGATGTCCAG
gtatgaactattacagtgaaaaccaccagactaattttgtaacaatatttatatgaaaat
gatgcctttatctttatagttttcaccttgttttctgatcagtattttatttgctctgtt
ctttttctccatattgaggctttgcatatttttattttgtctcacatctttgcacaatga

 3.02 Intr +  37094  37271  178  1  1   76   80   188 0.925  15.37
ttcaccctaaaagaacactctggtatagtgtgattctcttaaaataatatttaatatctt
cagacagcttggtctattgctttttattgttatgtccatgtacttttttgttttactggg
aagtctactaaggtcaggatttccactgcttacttattgatttgtctctaatgattgcag
GTTGAAGATGACAGCGATGCAGAGACCTATGGAGAAGAGAATGATGAACAGGGAAATTAT
TCTAAAAGAAAGATTGTCTCTAACTGGGATCGATATCAAGATATTGAAAAAGAGGTCAAT
AATGAAAGTGGAGAGTCACAGAGGGGAACAGATTTCAGTGTCCTCCTTAGCTCTGCAG
gtatgaattccagttgcatgcatactgtttagtgctctgaaagttgcacagacattttat
atatgtttttaaattctacttttataactagcaatttatcctttgttctttggattttta
attcaagtaaaggacagtgtttctaatggcttgtaagggaaaaaaatgagtttaagtgga

 3.03 Term +  38525  38604   80  0  2   61   37    73 0.716  -3.55
agatgtgagaagcagggaagtaaaacaaaaataatactttgggactgctttgaatttttt
cttcctcatgactttgatgttgctgtttagttctacctttcttctttatctgcctgtatt
tttgaatgctggcaccagactaagaacaataaagtgatgcattctcttctaacttaatag
AATGTGCTTTTCCGAGCAGGAAAGAAGTAGATCATAAAATTGTGAGTCAGGAGCACAGGA
TTCGTCATTACCGTAGATGA
ttcaaatagcataacttctttaggtttgtggattgctctcaactcattgactgttcaaga
actggtaacactaaataatttttcctgtaaaatgagtgcttccctcttggtacctatatt
ttggccaattatgggtttataagcacttttcttcaaggtgggagaaggggaatgaaggta

 4.02 PlyA -  40396  40391    6                               1.05
 4.01 Sngl -  43561  43241  321  1  0   88   38   212 0.974  11.94
 4.00 Prom -  57229  57190   40                              -7.55

 5.01 Init +  71801  72030  230  1  2   48   75   219 0.740  14.49
tttctccatacgaacttttcagtccatcagcttcctttctgtagaagatgaaggcatttc
ttctgtcctcctcatgcttttgtaacccatgcttctggtaccctgttttttgaatagtga
ggtaaaaatccagaaggaagtacggctttatcatgtctctggacggtgagcgtacttggc
ATGAATGAAGAGCTGATAGGAGCTATTCAAACCAGACAGCAAACTGATGGGATGACGCTG
CCATACATAAAAAACTCATTAATTACTTCCCCTGCTGGACAGCAGTATATCCTGAAAGGA
AGAAAGAAAGGAGCAGATGATGATATTCGTTTTGATAGGTGTTCTCTGTTTGAACAGCTT
GTCATTGAGAAGAGAATCCAGGAAAAGCTGCAGCTTCAGAGTGTGATCAG
gtagaatgggcaagagttatttgacagacagttaagtgacgtattttgggaggaaaaaga
gggcttagcatggaggtagctggaataaggttccaaaatgcttttgaaaatgttcatttt
ttcctgttagtctttttggctagaagcttttttttttttttttttttttttttaagcttt

 5.02 Intr +  83915  84044  130  2  1   31   97    74 0.298   2.38
acagagaactagtttccaatatatatgatgtgttttaacaaccctattaaaactgggcaa
aggctatgagcagactgttcacagaaaatgaaatgcaaatggctcttaaacatgtgaaaa
gatgctcaatgcactcataggagagatgcaaattaattacactgaaatacatattttcag
TTATCAGATTGACAGATCAGAAAGTTTGATTAGACTTTGCACTGGCAAGAGTGAGGATGC
GCAGTGTTGGAGAAGAAGGGCATTTCAAGTTGAGGGGAATTGGAGGAGCGGGGAGATGGA
AATGGGAAAG
gtagggccagcacattagagcaggacaggtgagctaatgtaggggcaggcgtgttgactt
tagcaaggagcgacagctggcgctctagtgtcatgggagaagcagggaaactagatagct
acacgcaataactacaaatgctggtcaccgcggaggcagacggccctacagataacagcc

 5.03 Intr +  93278  93391  114  1  0   79  109    39 0.455   4.82
gtgtcccagagttagatgggaaaggagtcttggagaggctggagtcttgcgcttgacttt
ggacaccctctactttatcttcctgtttccagtggagccccctccacctcttccaccagt
tatgcttggggtccctgcatccagagttcctctaattccatggccctaacctgtctacag
ATGAGAACCACCTGGGGAAATTGTGAAACTGCTGACAACCAGCCACACCTCATACCAATC
AAACTTCAAATCAGAAACTCTGGTGGGACTCTTGAGTGTTTTAAAGCTCTCCAG
gtgagtccagtgtgcagctgagcagaggaatcattgctcagattgctcctcctgtgaccg
agcccgcactacatctgtgacttctctgctgcccttttactcttgcctaaccgctccccg
caaccgcagctactttgctgtaccctctttaattatgcgtccatcctgaggtatgtgcac

 5.04 Intr + 124217 124390  174  1  0  -11   81   114 0.005   0.01
ctgtgagggtccttagttgtagttttgtttattgcacaagttttgtgttggttggcctct
tgccaggaggtggtgctttcaagagggcatcagctgtggtagtatagggaggatcaggtg
gtgggtgggaccctggagctcccaggagattatgtcctttgtcttgggctacgagggcag
GTAGAGAAAAACCATCAGATGGGAGCAGGGTTGGGCGTGTCTGAGCTCAGACTCTCCGTG
GGTGGGGCTTGCTGCGGCTGCTGTGGGGGTGGAGGTGTGGCTCTCAGGCCAGTGGAGTTA
TGTTCCCAGGAGAATTATGGCTGCTTCAGCTGTGTCATGCAGGTCACCAGGAAG
gtggggtaaagcaagcccttacccagctcccacgctgcccaaaaggccagtctcattccc
accatgcttctccaacagcacggagtttatttccaggccgcgggtgagcagggctgagaa
cctaccccaggctaccagcctcttggctgagaaaccaaacagggctttcaggtttcaggc

 5.05 Intr + 124728 124856  129  2  0   40  111    27 0.076   0.17
aacagggctttcaggtttcaggcctccccacctgctgtggcttctgtgctgtgtctgcac
tcctgattcatcccctctcccgagttctgtccaggaaaactttgagttctatcgaaattg
ttacaaagctcagctggaagttcccttctccttgtggtcttttcccagttcctctggtag
CCCTCCCCAAGGACCTCTGTGAGACAGTCAGAAATGGCTTTCCTGGGGACCAAGAGCCCA
CAGGGCTCTTCCCGCTGCTTCTTCTACTCCTGTATTTCACTTGACTCTCTAAATTTGTCT
CAGCTCCAG
gtaagtcatattcttctcttgtgatctggaccttcatgttccccagtgagggtgtgtgct
tgggggtggatgatccccctttcacactttcacactctgggcacgcaacagttttttggt
tgtctcctgtggcctacaggagcaatgcgcttgcttccttcaaagagtctgtggattatc

 5.06 Intr + 129545 129661  117  1  0   87   92    21 0.177   2.14
atgatcttgacgtctcctaagatattatttgtccattttgtatatgggaaaatggatgaa
tggagagttgagtgataactagtcagcagtggcagtagaactgggatgccccttaactct
ccgttgggagctgccatgatcactgttggctagactcaggaaactcccatttcttttcag
GTCAGTCCCTACCAGAGTGTCCGTTGGCCCATCTGCAGAATGTTCCTGTTATTCCAGCCT
CACCAATGTGTCCCATTAGACAGATCTCCTTCTAGCATCATGAGTAATGCCCATTGG
gtgagttgggcattttatgaggtgcattctctctccctgtcactttttaagatcctagag
cacaaattcccactagtactttgtgagagaggaagaccttgtatagcatcactttggcta
taggataattacatgacagatactggcgcagctatcttcacgtcccaatttcttccacac

 5.07 Intr + 137129 137269  141  1  0   77  100    28 0.062   2.53
ctgactgaagacctgctgttgctgcacacatgagcactgcaatttgtgccatccatgtca
gtgttactgtcactgggcagtggacactgctactgcctctgtccttttataaactgtttg
tagttgccaccacataatactaagaatggattctgcataatccctcattctcatccctag
TTTTTGATTCAAATACTGCGGGTGAGTATTTATGATCAATGTGGCCTCATTTACGTGCCG
ATGTCTAGAGCAAGAGATGCTGGAAAAGAAGTATCTAGAATTTTCTGCTTTGATAGTAGG
AGAGGGGCTCTGTTTTATAAG
gtgagggatgctaaggattaggaaggggattcagatcctggcggccaaaagaatgacaag
tggctccattagatggcatttgctttagcagttgtgaagggtggagggtaaattgatcat
caaactataggagagactgctaaagataaacacacaggattaatggataaattaattagt

 5.08 Term + 147281 147754  474  1  0   10   41   196 0.014   1.00
tattcagttaggaaaagaagaagtcaaattgtccctgtttgcagatgacatgatcgtata
tttagaaaaccccattgtctcagcccaaaatctccttaagctgatgagcaacttcagcaa
agtctcaggatacaaaatcaatgtgcagaaatcacaggcattcctatataccaataacag
ACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATAC
CTAGGAATCCAAATTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTG
CTCAACAAACTAAAAGAGGACACAAACAAATGGAGGAACGTTCCATGCCCACGGGTAGGA
AGAATCAGTATTGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAGTGCCATC
CCCATCAAGCTACCAATGACTTTCTTCACAGAATTAAAAAAAAAAACTACTTTAAAGTTC
ATATGGAACCAAAAAAGAGCCCACATTGCCAAGACAATTCTAAGTAAAAAGAACAAAGCT
GGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACCAAACAGCATGGTGCT
GGTACCAAAACAGAGATACAGACCAATGGAACAGAACAAAGCCCTCAGAAATAA
caccacacatctacaaccatctgatctttgacaaacctgacgaaaacaagcaatggggaa
aggattccctatttaataaatggtgctggtaaaactggctagccatatgtagaaagctga
aactggatcccttccttacactttatacagaaattaattcacgatggattaaagacttaa

 6.01 Init + 149464 149515   52  0  1   98   94    20 0.095   4.97
ctctcatctcagcctctcaagtagctgggactacacatgtgcaccaccacgctccgctaa
ttctttaaatttttggtagtgatgagttctcactatgttgcccaggctggcctcaaattt
cagggctctcatgatcctcttcagcctcccaaagtgctgggattacagctgtgagccacc
ATGCTTGGCCAGTTTTACCTTTGTAATGGTCATGTTCATAGCTCATCAGCTA
gtaagtttgcactgttcacttgtcttggatagtggtaattgctggaatattacattttga
gatccatccttagtttcttttcatctttctccctttttgagagtggtttaagaaaattct
aattgaagatctctgccatttttttctccttcccacttgttcttatttgagttatttgat

 6.02 Intr + 164308 164378   71  2  2   98  110    31 0.012   4.28
gtcatctgtgtgttttgtaattttggaaatggagttggaggtatgttccagttttatcct
tgcctctccctttgagtttgagcacttcagaaatggcacttttgctctagcagggaaatt
tagagaactgagagtttccgttggcttttgcataaatttttttttttttcctattcctag
GGGACTCATTCTCACAGTTCCGGTTTGCTGAGGAGAAAGAATGGGATAGTGAAGCTTCTT
GTCCAAAACAG
gtaagataagagttgtgttaagtgtggactggctcttcttcaaggctgaaggctaacacc
ttttacgttcttgagatagagtcttcatgtagaaaagagtagtaattcttacagtgtacc
ctcagctaaacttttcagaaaattttcagggggctgaaattccacaggtccttgaagcta

 6.03 Intr + 169273 169368   96  0  0   36   98   112 0.920   6.29
gctttggttttactgatcataatgtggagatgcagaaactctaacacataagtgtgatgt
atggtgtgacttattcctagccaaatgtaactccagtggattatttacagtttcttcttt
tatttccaaaaggtcataatcatcacctgatattttattttcttttatatatatatatag
AATTCAGCATTTTATGTGGATAGTGAGTTATTGGTTCGAGCCCTTCAAGAGCTGCCTCTC
TGCCTCCGACTCAACGTTGCTGCCGAACTGGTCCAG
gtaaaaatcccgaagccctcttgaagcgggtggattagggcaggaggagaaaaagagggg
aacacttccctcagcaggatgtctcagtgtcagcttccctttataaaagtgagggtttca
tatcaaggtagcattttgtaaagtttaaaggagaatccaaaaattttttgaagttacttt

 6.04 Intr + 172448 172808  361  1  1  104   86   287 0.780  23.97
accccagatgtcaggaagggtgcccccaccagggcctggaaaggagccactttgtgaact
atctgaattgagtttcctctgtcacaaagtttgatggcttcgtttagcctcctatgtatt
tacttaagccaatatggcaagactcacatttttaactcagtttttatacttctctttcag
GGTACAGTTCCTTTAGAGGTTCCTCAGGTGAAACCAAAGAGAACTGATGATGGCAAGGGA
TTAGGGATGCAGTTAAAGGGGCCCTTGGGGCCTGGAGGAAGGGGGCCCATCTTTGAGCTG
AAATCTGTGGCTGCTGGCTGCCCTGTGTTGCTGGGCAAAGACAACCCAAGCCCGGGTCCT
TCAAGGGATTCTCAGAAACCCACTTCCCCACTGCAGTCAGCAGGAGACCATTTGGAAGAA
GAACTAGATCTGTTGCTTAATTTAGATGCACCTATAAAAGAGGGAGATAACATCTTACCA
GATCAGACGTCTCAGGACCTGAAATCCAAGGAAGATGGGGAGGTGGTCCAAGAGGAAGAA
G
gtatggctttcattttattccccgtgaatcttgattctggtgttttttcaagaacagccc
cgcccgcatcacatccgcacacatccctctgggtgtctgacattgatccagtgttgtcca
ctgacatctatttctgtgctcacgtctctgcttccccctgagctgacctttctgacaacc

 6.05 Term + 173575 173690  116  2  2   93   42   128 0.737   6.45
cagaataaagagcaaatcctctacccagctttatttgtttagatattactgtatcatctt
agggagtaagaataatgagaatgtttccccttgttgtaaggaaagtaataaattgggctg
aattataccttcaattttaggactcatctgagggtgttaacattgttttttttcccccag
TTTGTGCAAAACCATCTGTGACTGAAGAAAAAAACATGGAACCTGAGCAACCAAGTACCT
CCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATGATTTCCTAA
aaaggggaaaaaaagtgcctgaagcaaatcttggttgccttctaacggcaggtgggcata
aggctgtccttcaggaccagccagtttacaagcatgtctcaagctagtgtgttccattat
gctcacagcagtaaatgcctacctctgtgtttgacatctgaaagaatacattgaagcagc

Predicted peptide sequence(s):


>AVEN_1|GENSCAN_predicted_peptide_1|97_aa
MQAERGARGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFR
GARGGRGGGGAPRGSRREPGGWGAGASAPVKVQCGGR

>AVEN_1|GENSCAN_predicted_peptide_2|129_aa
MHFADPKVLPVVQDVEVEDSDIVSGIYSFLWVLGLTNFKNEAADRREVKPHTFAVSVTVF
KGSASRVVCFSRWVRGLADFRNEAADPRVILVTVVAAASLLATSHNDSRYTPELRRSPPL
TFLLMMLSG

>AVEN_1|GENSCAN_predicted_peptide_3|93_aa
MQPVTDVQVEDDSDAETYGEENDEQGNYSKRKIVSNWDRYQDIEKEVNNESGESQRGTDF
SVLLSSAECAFPSRKEVDHKIVSQEHRIRHYRR

>AVEN_1|GENSCAN_predicted_peptide_4|106_aa
MGRNQSRKAENSKNQSASCPPKERSSSLAREQSWMENDFDELTEVGFGRLVITNFSQLKE
AVRTHRKEAKKLEKRLDEWLTRINSVEKTLNYPMGLKTMAQECSKQ

>AVEN_1|GENSCAN_predicted_peptide_5|502_aa
MNEELIGAIQTRQQTDGMTLPYIKNSLITSPAGQQYILKGRKKGADDDIRFDRCSLFEQL
VIEKRIQEKLQLQSVISYQIDRSESLIRLCTGKSEDAQCWRRRAFQVEGNWRSGEMEMGK
MRTTWGNCETADNQPHLIPIKLQIRNSGGTLECFKALQVEKNHQMGAGLGVSELRLSVGG
ACCGCCGGGGVALRPVELCSQENYGCFSCVMQVTRKPSPRTSVRQSEMAFLGTKSPQGSS
RCFFYSCISLDSLNLSQLQVSPYQSVRWPICRMFLLFQPHQCVPLDRSPSSIMSNAHWFL
IQILRVSIYDQCGLIYVPMSRARDAGKEVSRIFCFDSRRGALFYKTESQIMSELPFTIAT
KRIKYLGIQITRDVKDLFKENYKPLLNKLKEDTNKWRNVPCPRVGRISIVKMAILPKVIY
RFSAIPIKLPMTFFTELKKKTTLKFIWNQKRAHIAKTILSKKNKAGGITLPDFKLYYKAT
KQHGAGTKTEIQTNGTEQSPQK

>AVEN_1|GENSCAN_predicted_peptide_6|231_aa
MLGQFYLCNGHVHSSSARDSFSQFRFAEEKEWDSEASCPKQNSAFYVDSELLVRALQELP
LCLRLNVAAELVQGTVPLEVPQVKPKRTDDGKGLGMQLKGPLGPGGRGPIFELKSVAAGC
PVLLGKDNPSPGPSRDSQKPTSPLQSAGDHLEEELDLLLNLDAPIKEGDNILPDQTSQDL
KSKEDGEVVQEEEVCAKPSVTEEKNMEPEQPSTSKNVTEEELEDWLDSMIS