--------------------------------------------------------------------------------
GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (11449 bp)
--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (4 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1220       1417   0    Initial    198    53    Marginal
cccttcagtgaaaatggtctttcgcatctggcccttctttttggaggcgtgcttgccagc
agtcaaaatggctccattccggaatagatttaataggaagtgaagctgtgacggcgaggc
gttgcccggcctatctttgctaggcgttctcagaattagttctttctgcccacactagac
ATGGCGCTTGCCAGCGTGTTGGAGAGACCGCTACCGGTGAACCAGCGCGGGTTTTTCGGA
CTTGGGGGTCGTGCAGATCTGCTGGATCTAGGTCCAGGGAGTCTCAGTGATGGTCTGAGC
CTGGCCGCGCCAGGCTGGGGTGTCCCAGAAGAGCCAGGAATCGAAATGCTTCATGGAACA
ACCACCCTGGCCTTCAAG
gtgtggagccagcccccttgccaggctgagtactgaacgcccgcgacttgcctggcctcc
cagcctgaccggagtttgcggtggccttggccaccaacccaggcggaggctgggtcctct
cgttcggaccgcagcagttttgctgtctcattggcccaggaggcccctgtctttgctctg

Exon  2 +       2427       2780   0   Terminal    354    92   Excellent
caagggattgatgtgaagctcgggtgacattaatatatggtgaagtatagaagtatactg
tgaagtataaaaggacggagaaagagatgtgctgggtttggattgatgcaaaaagaagta
tgtaggagtgtttttgtggtcttatgtggcctgttttgtgttttcctctgatcttaacag
TTCCGCCATGGAGTCATAGTTGCAGCTGACTCCAGGGCTACAGCGGGTGCTTACATTGCC
TCCCAGACGGTGAAGAAGGTGATAGAGATCAACCCATACCTGCTAGGCACCATGGCTGGG
GGCGCAGCGGATTGCAGCTTCTGGGAACGGCTGTTGGCTCGGCAATGTCGAATCTATGAG
CTTCGAAATAAGGAACGCATCTCTGTAGCAGCTGCCTCCAAACTGCTTGCCAACATGGTG
TATCAGTACAAAGGCATGGGGCTGTCCATGGGCACCATGATCTGTGGCTGGGATAAGAGA
GGCCCTGGTGAGTTAAGCTGCAACCACATGATCCTTGGGCTGACACTACAGTGA
ggaggggttggatggacagatgaattaaagggcttggtgtcaatgctgaagaagtgtaat
taggtccttagcccttccttctctctttttttttttcctgtttttttagactgtgtctca
ttctgtcgctcaggctggagtgcagtggcatgatctcagctcactgcagcctccgccccc

Exon  3 +       7116       7269   0    Initial    154    49    Marginal
tggcttgcattaaaatcacctgggggacttaaaaaacaagttccatacctgtttcccacc
ccacaccagttataaaaaatacctagggtaagtcctgtgcatttttgaaaaaaatctttg
ttagatgactctagtgcacagtgagatgtgagaatcactgaaacaggaaaaagagtagtg
ATGCTATTGGCAGAATTTCAGAAGACAGGAGGAAGCGTGGGTTTGTGGCGCACAAGAGAG
ATGAGTGTGGTAGGTAATGGAGAACCACTGGTATCTAAGTTTAGGAAGTTTGAATCTGTA
CATGATGACAAAGACATCCAGCTGGAGGGATCCA
gtaggcagttgggattgaacactttgtctaaattttcatctgtaccaaaagtcagctagt
tttttcataaagggccaaatagtaaatattttaggtctgcaggcctaaatctttgtctca
aatacttaactctgccggtgttgcacaaaacaaccatagacagtatggaaacagtggctc

Exon  4 +       9726      10012   1   Terminal    287   100   Excellent
atcactttaacccaggaggcggaggttgtggtgagccgagattgcgccattgcactctag
cttgggcaacaagagcaaaactccatctcaaaaaaaaagaactactgccttggcatatga
attagatatcaaaaggggtgatctttttttttttcctgctaacctcatctccctttccag
GCCTCTACTACGTGGACAGTGAAGGGAACCGGATTTCAGGGGCCACCTTCTCTGTAGGTT
CTGGCTCTGTGTATGCATATGGGGTCATGGATCGGGGCTATTCCTATGACCTGGAAGTGG
AGCAGGCCTATGATCTGGCCCGTCGAGCCATCTACCAAGCCACCTACAGAGATGCCTACT
CAGGAGGTGCAGTCAACCTCTACCACGTGCGGGAGGATGGCTGGATCCGAGTCTCCAGTG
ACAATGTGGCTGATCTACATGAGAAGTATAGTGGCTCTACCCCCTGA
aagagggtggatgcagctgcttgtgtttcttggggtgactgtcattggtaatacggacac
agtgacccatcctccatcctatttatagtggaagggccttcaattgtatcagtacttttt
tttaagctctggcacattgacctctatgtgttaccagtcattaatgagctgctgcagagg

--------------------------------------------------------------------------------