GENSCAN 1.0	Date run: 15-Jan-104	Time: 07:20:14

Sequence GCH1_1 : 63194 bp : 42.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    815    963  149  0  2   84  -12   121 0.213   0.73
tgacacttgccccgacagcggtgccacctggcccctaggtggcaggtgcgtttttaacta
aacccaagagtctgaagtcacattattctcttgccttgaaagcttaagagttggttccta
atcggtggcttaactcggtctctctccaggcaaggccacctgtttgctgatctttcacag
GGCGAGGGGACCGGAGCCCTTCAATGCAGCGCCCTCTTGGCCTGAAGAGGGGGCGACTGG
GCGCCCAGACCGCGTCTTTCTCACTGAGATCCCAGCTCCTGGACGACTGCCTCTTTTCGG
GTTCGGCTCATTCCGCAATAAGTGGAGGG
gtcccgcctgatcctaggggccggcgcccttttccttccctccctgcgcttgcgaacccc
tccgggcgtctccggagccgcgacccctgctggggaccccgggggcgggaggccgagggg
cgcggcgagggccgtgacgcgaggcggggccggccaatgggagcgctccgcggcgcaggc

 1.02 Intr +   1244   1691  448  1  1   74   82   327 0.360  22.70
gggggcgggaggccgaggggcgcggcgagggccgtgacgcgaggcggggccggccaatgg
gagcgctccgcggcgcaggctgagccgccgggccataaaaaggaggcgcggccgggcttt
ccagcctgtggccgctcccggctcggagtgtgatctaagcaggttgcgtaccttcctcag
GTGACTCCGGCCACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGCCGCAGACCTCGA
AGCGCCCCGGGGTCCTTCCCGAACGGCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCT
GTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGG
GATCCGCCGCGGCCCGGGCCCAGCAGGCCGGCGGAGAAGCCCCCGCGGCCCGAGGCCAAG
AGCGCGCAGCCCGCGGACGGCTGGAAGGGCGAGCGGCCCCGCAGCGAGGAGGATAACGAG
CTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGGGCGAGAAC
CCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGCCATGCAGTTCTTC
ACCAAGGGCTACCAGGAGACCATCTCAG
gtcagtgcgcccgcgggctgctagagcgtgcgggcggcgggggcggtgcttgcaggaaac
gcgcgccggctccaggaagtttccggagttgcctcacttttggcgcaggaagccgggcgc
tgtcacctccgaacccgccctagcctgccgccctgccgaggccctgcgtggggcacagtc

 1.03 Term +   1835   1965  131  0  2   33   42   117 0.726  -1.04
cagttcttcaccaagggctaccaggagaccatctcaggtcagtgcgcccgcgggctgcta
gagcgtgcgggcggcgggggcggtgcttgcaggaaacgcgcgccggctccaggaagtttc
cggagttgcctcacttttggcgcaggaagccgggcgctgtcacctccgaacccgccctag
CCTGCCGCCCTGCCGAGGCCCTGCGTGGGGCACAGTCGGGGCTTCCTGGGTGGCAGCGAC
CTCTCAGCCCCGGAACTCGCTGCAGCCGCCTTCCAGGGGCCCTTCCCGCTCCCAGCGCGC
AGCCCTCCTAG
aacgccccgggtgggcgtggacgggagcccggagccctctcgcctgagcgcccagcgcgg
gattctcggggtacctgcggttccaaacttgcccacgataaggatcacctgggcacttgc
tgcggcgacggcttcctgggtagttccttattgagatcccattgtcagggtgtgtatctg

 2.05 PlyA -   2726   2721    6                               1.05
 2.04 Term -   8107   7893  215  2  2   50   41   136 0.630   1.51
 2.03 Intr -  11876  11849   28  2  1   53  115    33 0.088  -0.73
 2.02 Intr -  18689  18584  106  1  1   92   95    57 0.487   6.10
 2.01 Init -  29137  28359  779  1  2   42   37   244 0.051   8.90
 2.00 Prom -  29187  29148   40                              -8.75

 3.02 PlyA -  29257  29252    6                               1.05
 3.01 Sngl -  30751  30068  684  1  0   66   47   199 0.750   9.54
 3.00 Prom -  31204  31165   40                              -6.15

 4.02 PlyA -  31378  31373    6                               1.05
 4.01 Sngl -  32262  31606  657  0  0   59   43   310 0.845  19.52
 4.00 Prom -  38066  38027   40                              -6.65

 5.01 Init +  38617  38685   69  0  0   65  116    29 0.358   4.50
tatctagttttaatttgtattcccttaatattttagggaggattaacgttcgtttatgtt
gactgtctattcatgtttatccataattctacctttctataaaattggacatgttactaa
agcaagcctctgatttcagatgtcctaaacgatgctatatttgatgaagatcatgatgag
ATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTGTGAGCATCACTTGGTTCCATTT
GTTGGAAAG
gtaaggttctctttgttgtttcccagcaatttaaaacatagtgaaagtttttcaattaga
ataattatatttaaaatttttagctgccaattgctgatatctcaggtatttacaattata
catatatggttattctttattaacctgactaataacttgaaacttaaaaaacaaaaccaa

 5.02 Intr +  44276  44331   56  1  2   97  107    12 0.188   0.86
aaaatacatatataaatgtttcattttctaagtcttaacagttccagatgttttcaaggt
aatacattgtcgtgataaattacataaaagtgtactatattctttctatatttccttatt
ttgtcacaaagaaggcactgtattttcactcagctaatgatttccgtctcttctctgaag
GTCCATATTGGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAG
gtaagtgtgactgtgcagtgaacaagaatacaggtttataggacctgccctcatctgctg
agaatctatctcatcaggctttctctctttacctgtatggatctaacttggaagtcatat
tgcaacttaaagacttggagggtctgaaacacagatgccccttccttctcgtcccctact

 5.03 Intr +  56882  56913   32  2  2  122  121    -9 0.135   2.66
caagttgactttagactacatctccctgtggtacttgtatctttctgtcatcttgccata
agctttatttcctcttgcagcccacttgcttcaacaatgtcctttttgttttatgaggaa
ggcttatcaattttacttcaaatgatttgtgattaactaaaacaattctttcttttctag
GATTGTAGAAATCTATAGTAGAAGACTACAAG
gtaagctttaaaaatctgtattaacagaaaacatttttcttttttttctttttttaaatt
tttatttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtgcaatctc
ggctcactgcagcctcagccttccaagtagctgagattataagagtgcatcaccatgcct

 5.04 Intr +  58160  58244   85  0  1   80  111   129 0.138  12.36
tgaatccgggcctctctgtggcccagtcagcagacaaagcagtctggtaaaagctggtgt
gtcttggctcttaaatctcacagaagtctgatttttaagatttcaaatgttctagagaca
gaaaaagcttccagctgtttgtgtcagactctcaaactgagctccttatcacatccacag
TTCAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGCCTGCTG
GAGTCGGGGTAGTGGTTGAAGCAAC
gtaagtctgcatctgcctttagtaacgtcataatggtgcactagaagtgatcttgctatt
tagtgcttctcatattttgtagcaccaggtgatgccacacaactgatatgataactgtag
atttccatccctgagcctaaagctcttttaccactttcatttactgttactgatatagga

 5.05 Intr +  59869  59936   68  1  2   88   57    10 0.888  -4.47
gttcaatagcaagaaccgcagttacttttgcatgaacctaatagataacatttgtgtaag
aagggatatttcgatatacttggtaactgtgagctgagatttaatctttaggcctgcttt
taaaaaccaaaccagcagctgtctactcctttaaacaacctgtgttgccttattttgtag
ACACATGTGTATGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCAC
AATGTTGG
gtgtgttccgggaggatccaaagactcgggaagagttcctgactctcattaggagctgag
cttcattcagtgtgtgtgcgttggttgccgatcgtactgccagtagcattgtctgtctgt
ccggtcttgtttgtacattccattttcaattgttacagatgtgaactttattccttgtca

 5.06 Intr +  60958  61153  196  2  1   49   35   195 0.725   7.85
acttagtactcacactgcaaataactagtcagctcagttttaactttataggtttattga
gtttcctttgtgtgatccatgtagatgcctcaaaatgtttcttcttcttcttttttttaa
tcttataagatatttttctaagtatttccagaaacatttgagagtgcccatcattttcag
GTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAG
ACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAA
TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTG
TAACTCCGTATAGATG
gtataggtattttaatcctggaagctgttgccttattaatgattatcttaaaatttcctc
cattggggcagcgtgggccaaattaaaacaaacaaaaccgcaactcctccacagaaacac
aaacacagttattccatgaagtttagtatttggttgacatagtgctcttcaaattcatcc

 5.07 Term +  62528  62750  223  2  1  109   38   179 0.980  10.41
aaggaagagtaggctggggcagggagtggaaaagggtttccttccctcttctaggaagag
cctgcccagggcaaaacttccagttagtgcaaggggttttgtgctgctcttctgtcccat
gcccaacaacctcctttccctcttgctaatggtctcctccccattccgtgctgcccacag
GCAGAGGCCGCCCCTGCCCTCACTGGTGGCCAGCATGTCCAAGTACTGGGGCCTGCTGCT
CCTTGTGGGACCCTGTGGACCGTTGGGTAGCAAATCTTATCAAAGTAGGAATGCTTACTG
GCATAAAACATTCCTAGAACCACCACTCATAGGTGTCAATAAAACGATGAGCTGCTCAGC
TAAGCCCGAGTTGCTGCTTCTGAGTTTTGTCACCGAAGATTGA
ttggccaagttccttttcacttagtggaagagcagttgcagacatgaaaggttttcaaga
agcctttctgtcaaaacagagcacctggattcatcatcacaggcatgggtcctcctgctg
atggagagaagaagaagtctcaagagatcaaggggaagtgtgagtacctgactcctcacc

Predicted peptide sequence(s):


>GCH1_1|GENSCAN_predicted_peptide_1|242_aa
XRGDRSPSMQRPLGLKRGRLGAQTASFSLRSQLLDDCLFSGSAHSAISGGVTPATAHCPR
PPAEFSRRPRSAPGSFPNGSGCGGSMEKGPVRAPAEKPRGARCSNGFPERDPPRPGPSRP
AEKPPRPEAKSAQPADGWKGERPRSEEDNELNLPNLAAAYSSILSSLGENPQRQGLLKTP
WRAASAMQFFTKGYQETISACRPAEALRGAQSGLPGWQRPLSPGTRCSRLPGALPAPSAQ
PS

>GCH1_1|GENSCAN_predicted_peptide_2|375_aa
MGGKNQYRENGHRFNAIPIKLPMTFFTELEKTALKFIWNQKRDRIAKSILSQKNKAGGIT
LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTQPSEVMPHIYNHPIFDKPDKNKKWGKESL
FNKWCWKSWPAICRKLKLDPFLTPYTKINSRWIKHLNVRPKTIKTLEENLGNTIQDIGMG
KDFMSKTPKVMATKAKIDKRDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLIS
RIYNELKQIYKKKTNNPIKNEPVKIHIALGGCDGVQGLPDLCLIGTPQEVLFQVQTAKAM
ATAHDDHRCSHGRYTLESREKVHKETVMERRCNVGKTEQIPQNARNLDQSTQEALGGKMD
FEECKIPTYFKFYNT

>GCH1_1|GENSCAN_predicted_peptide_3|227_aa
MKVDIKMFFETNENKDTTYQTLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTYSKASRRQEITKIRAELKEIETQKSLQKINESRSWFFEKINKIDRPLARLIKKKR
EKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEDMDKFLDTHTLPRLNEEE
VQSLNRPITGSEIEAIINSLPTKKIQDQMDSQPNSTRHIRRSWYHSF

>GCH1_1|GENSCAN_predicted_peptide_4|218_aa
MEDQMNEMKQEEKFREKRIKRNEQSLQEIWDYVKGPNLYLIGVPESDRENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGQV
THKGKPIGLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDK
QMLRDFVTTTPALQELLKEALNMERNNRYQPLKKHAKL

>GCH1_1|GENSCAN_predicted_peptide_5|242_aa
MVIVKDIDMFSMCEHHLVPFVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQ
IAVAITEALRPAGVGVVVEATHMCMVMRGVQKMNSKTVTSTMLGLQNHSFHAPERAQNEL
TVEDIMSCVQRFNQSVSYQRSVKMHWKLLVPVSFVVYVGLVLIVTPYRWQRPPLPSLVAS
MSKYWGLLLLVGPCGPLGSKSYQSRNAYWHKTFLEPPLIGVNKTMSCSAKPELLLLSFVT
ED