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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (6317 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       4274       4443   1   Internal    170    98   Excellent
actcttcatctctgccactgtagcaccaaagcagccataaacaatatgtaaataaacaga
tgtggctgtattccagtacaactttacctacaaaaacaggcatcagaccagcttgccaac
ttgtggcatagactgtttgctacatggagcttgttccagccactccccattatcctgcag
ATGTGCTTTTCCAGACTGATCCAACTGCAGAGATGGCAGCTGAGTCATTGCCTTTCTCCT
TCGGGACACTGTCCAGCTGGGAGCTGGAAGCCTGGTATGAGGACCTGCAAGAGGTCCTGT
CTTCAGATGAAAATGGGGGTACCTATGTTTCACCTCCTGGAAATGAAGAG
gtaagaatgttagccctaaagctaaagggggatgttacctttcccttctcaactaatatc
tatgttccctttcctcatttccttgaaggaagaatcaaaaatcttcaccactcttgaccc
tgcttctctggcttggctgactgaggaggagccagaaccagcagaggtcacaagcacctc

Exon  2 +       4751       4882   0    Initial    132    70        Good
ctggcttggctgactgaggaggagccagaaccagcagaggtcacaagcacctcccagagc
cctcactctccagattccagtcagagctccctggctcaggaggaagaggaggaagaccaa
gggagaaccaggaaacggaaacagagtggtcattccccagcccgggctggaaagcagcgc
ATGAAGGAGAAAGAACAGGAGAATGAAAGGAAAGTGGCACAGCTAGCTGAAGAGAATGAA
CGGCTCAAGCAGGAAATCGAGCGCCTGACCAGGGAAGTAGAGGCGACTCGCCGAGCTCTG
ATTGACCGAATG
gtgaatctgcaccaagcatgaacaattgggagcatcagtcccccacttgggccacactac
ccacctttcccagaagtggctactgactaccctctcactagtgccaatgatgtgaccctc
aatcccacatacgcagggggaaggcttggagtagacaaaaggaaaggtctcagcttgtat

Exon  3 +       6176       6232   0   Terminal     57    73        Good
agctctctaaggatgctaggctgatccagaagtttagcaatgtacttactttttcatttt
gtgtcaaagaggaaatggctttcctgtattttccctgcccactatctgctagcattatgg
agactaggtgatcacagtgtttcttcaaatatctgtttaccagttagttttgtgtgccag
GTTCTGGTTTCTGGCATGAAGAACAATGAAGATGTACAGATAATTCCGGACTTGTGA
acgactaccaaggactttatatcagaaacttaggagtcccatgaccaaagtaacactgga
gagatgttaggtcttctctcacccac
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