--------------------------------------------------------------------------------
GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (6114 bp)
--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       3856       3912   0   Terminal     57    41    Marginal
gaaaaagcttgagggatgctaaagaacctaacacatcatgaaagtcaagctctagaggaa
ttgggagagagggagctatcctcaagccagaccttgagggggtaaaagcaccacctgctc
cccgaccagggtggaaagagtgaaatagctattattcctctcactcccttacccttgcag
CTTGCCATGAAGCATCAGCAGCTCAAAAGGAAAATGCAGGTGAAGACCCAGGGTTAG
ccagacaggcaccaaagccaaggaagcagagatccagccttctgggtaagcctctttccc
aatgcctggtatagaattctgatgcatgaaacagcaagatatctgggggccagtctgccc
tcacaggcacaagcacagggacacagctacacccatattcctagggagggcttggggtgc

Exon  2 +       4807       4917   0   Terminal    111    90   Excellent
aggttggtctttggggctcctgtgaatctaacctccatccctctgacttctgtgtaagca
cctccaggcctcccttccccttccccttcccctacctctccttccccaattccctggctc
tctttcccttccttttttcttcctacccctttaccccatttttttctgtggctgtcctag
GAGCCGTCCATGACGTTAAAGACGTCCTTGACTCAGTACTATAGCTGTAAGGAGAAGCTG
AGAAATGATACCCAGGAGCAGCAGGCTTTACGTCTTCAGCCTAAAACCTAA
aaaaaaaaaaaaaaaaaaaaatttaaaacagctattaaactgaaagcatctgtaatactt
ggagtatgtgtgtgttttccttaagaagagatggggtatgaaacctggccaggagcccaa
aaggttggaagagcactccatgaggcttcaattggcaccctggcccttcctcccgaaaca

Exon  3 +       5434       5524   2   Terminal     91    54    Marginal
catcagtgttgagtgggacttttctcattgccctggatttggctctaggacccacagcta
gaatcatagaccccccaaataccccacattccatggagaacttctgacatctggagcctg
cccaccaccctgggacttccttagagctagaaaagccagcccaatcccaatcaatcacag
AACTATCATTCGCTACCCCGTGGAGAAGGAGAAAAGTGGAATCATCAGGGTCACTGGCTC
TGATGAGCACTGGGGAAAGCAGTGCACATAG
caaagagatttttcttgaagatctccatggaagaagggagggagatgcttcttctaccct
tcaagtcaagtgaagggctgtggaaatcactcctagattgaaggttccagtccaggagga
gacaggcatctcccccaccaacctcccatccccagctgaatgcaccctctagactgacct

--------------------------------------------------------------------------------