GENSCAN 1.0	Date run: 15-Jan-104	Time: 04:49:02

Sequence GALNT6_1 : 28797 bp : 49.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1225   1691  467  0  2   66   80   609 0.811  51.02
ccctccttaccctgtgttggctcacttctctctcttgtcccctcctttctcaggctgagg
ccccagcttgtggccaccacaacgtatcaagctatctccagggttgggctcaggactcag
agctgacgcagctggggtgccccttggttctggaggatgaggctcctccgcagacgccac
ATGCCCCTGCGCCTGGCCATGGTGGGCTGCGCCTTTGTGCTCTTCCTCTTCCTCCTGCAT
AGGGATGTGAGCAGCAGAGAGGAGGCCACAGAGAAGCCGTGGCTGAAGTCCCTGGTGAGC
CGGAAGGATCACGTCCTGGACCTCATGCTGGAGGCCATGAACAACCTTAGAGATTCAATG
CCCAAGCTCCAAATCAGGGCTCCAGAAGCCCAGCAGACTCTGTTCTCCATAAACCAGTCC
TGCCTCCCTGGGTTCTATACCCCAGCTGAACTGAAGCCCTTCTGGGAACGGCCACCACAG
GACCCCAATGCCCCTGGGGCAGATGGAAAAGCATTTCAGAAGAGCAAGTGGACCCCCCTG
GAGACCCAGGAAAAGGAAGAAGGCTATAAGAAGCACTGTTTCAATGCCTTTGCCAGCGAC
CGGATCTCCCTGCAGAGGTCCCTGGGGCCAGACACCCGACCACCTGA
gtaagtagcacccagagtccttgtggggagaccagggctttgctaaaggcatggctagta
tggccagggccatagatcaagggccagagaaagagttgaagggaattttataatatgggc
aaggatctcctctatgcctcacttctttcccagaacaactgtgctgatcccaggggttgt

 1.02 Intr +   3615   3787  173  0  2   82   72   292 0.998  26.59
tgggtggcagataccggggaagacaggaacagggaacagctgttcccacctgctatagag
aatgtaggctgtggttcagaggagtggaggatggtctgggggagtctctggatggggccc
tccccacacctggtactcccagggaccaggagaactttgtccgtactttcatacttccag
GTGTGTGGACCAGAAGTTCCGGCGCTGCCCCCCACTGGCCACCACCAGCGTGATCATTGT
GTTCCACAACGAAGCCTGGTCCACACTGCTGCGAACAGTGTACAGCGTCCTACACACCAC
CCCTGCCATCTTGCTCAAGGAGATCATACTGGTGGATGATGCCAGCACAGAGG
gtgaggctggaggggcccagaggagggggccggggtctcccctgggcactcaaaggagga
gggcagttcctttcaagggagcaggcaccacctcatgagcctgttgcctgacatcacagc
tcatcttaaaggccaggagcaggaagaagtcaggtaggggcaggtagaccatgcttcctt

 1.03 Intr +  15403  15552  150  2  0   72   74   252 0.447  22.33
catcttccctgttaacctccttccccagctccggcttctgtggaatggctcagtacagca
ggtgttgggggtttaaaattcaggcctgctagaggcctgagagcccctagcttggtgccc
acaggggattgggtatacagcaaagtggtggactggccacaatgacactgtcccttccag
AGCACCTAAAGGAGAAGCTGGAGCAGTACGTGAAGCAGCTGCAGGTGGTGAGGGTGGTGC
GGCAGGAGGAGCGGAAGGGGCTGATCACCGCCCGGCTGCTGGGGGCCAGCGTGGCACAGG
CGGAGGTGCTCACGTTCCTGGATGCCCACT
gtgagtaccagggcaccggcctgggtgtaacctggaggctccctccctgctagaatgagc
cagggccacagcctccccaaggccccttcctgttctctcttccgggagtgaaggaggctt
gggacccactccaggtgcctctacccctttctcaccccaatcccaaggatgtttcatcaa

 1.04 Intr +  16627  16861  235  2  1   91   80   279 0.889  24.15
agaggggtggtagaagggttttaggaaattctgtgtgctccctgtagctgtggggcttgc
tgcctgtaacccaggagtaggtggactgtctcttatcctcctgggcattccctccaggat
gcagcttgggctctgctgtgggcagggccctgactgctgcctcctggttggggcctgcag
GTGAGTGCTTCCACGGCTGGCTGGAGCCCCTCCTGGCTCGAATCGCTGAGGACAAGACAG
TGGTGGTGAGCCCAGACATCGTCACCATCGACCTTAATACTTTTGAGTTCGCCAAGCCCG
TCCAGAGGGGCAGAGTCCATAGCCGAGGCAACTTTGACTGGAGCCTGACCTTCGGCTGGG
AAACACTTCCTCCACATGAGAAGCAGAGGCGCAAGGATGAAACCTACCCCATCAA
gtaaggaccgcagcctggtgagcccccaacctggccccagtcctacccagttccaggaac
ctgtgccatctcacatcaacatttgttaggtgctctatcaagcacttgacatattgtgat
taatcctcactccctatgaagcaggtacaatactaagaatactaaggctcatagtgataa

 1.05 Intr +  20144  20261  118  2  1   98   80   156 0.970  16.27
ggaagaggacatagtaaaagctaaatgatgagtgagttagtggatgaggggctgcacgtc
ctgagaaagaggaaaggagggggaggtgggttaggaggggagtccacaaacagctttccc
cgccaggctccgctcctcctctcccagaagatgcacacacttctccctctgtctctccag
ATCCCCGACGTTTGCTGGTGGCCTCTTCTCCATCTCCAAGTCCTACTTTGAGCACATCGG
TACCTATGATAATCAGATGGAGATCTGGGGAGGGGAGAACGTGGAAATGTCCTTCCGG
gtgagagtgaagagggctttggggggaaccacaacatcccaggcgacagcttgagaaaca
tctctcaggcagaggtggcatcagggacatcccatctggaactgaactagaaagggtggc
tatttcccagtgtgtctcttcctcttttctgctccccctgtccatggcagtagggcttgg

 1.06 Intr +  21650  21850  201  1  0   87   78   201 0.952  18.48
cgtgtagtcatggcctaggaagaagcctggtcggtatcctttttcccagggagagagagc
agcatttgcccaagtccttggacctggggtctggtgctctgggaatagaatagagctgct
tatggggagactgtctcacctagcccactgaaggcctcatcctgtctcctcttacatcag
GTGTGGCAGTGTGGGGGCCAGCTGGAGATCATCCCCTGCTCTGTCGTAGGCCATGTGTTC
CGGACCAAGAGCCCCCACACCTTCCCCAAGGGCACTAGTGTCATTGCTCGCAATCAAGTG
CGCCTGGCAGAGGTCTGGATGGACAGCTACAAGAAGATTTTCTATAGGAGAAATCTGCAG
GCAGCAAAGATGGCCCAAGAG
gtgagaggaaatggttctcggagaggtttagatgaagagaagtacggcccccagaccctg
ttcatgggcctaatggctgggacccacctcatctctaccatctggcgcctcccttcaccc
tcagggacctgtgagctagagcccaggagaaggccacaaggcacataggtttcaaaagct

 1.07 Intr +  22721  22852  132  1  0   11   97   138 0.921   7.84
gtagtcccagctactcaggaggctgaggcaggtgaatcgcttgaacccaggaggggaagg
ttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccct
cttaaaaaaaaaaaaaaaaactggtggaactgatccttagggggctggcttgattgacag
AAATCCTTCGGTGACATTTCGGAACGACTGCAGCTGAGGGAACAACTGCACTGTCACAAC
TTTTCCTGGTACCTGCACAATGTCTACCCAGAGATGTTTGTTCCTGACCTGACGCCCACC
TTCTATGGTGCC
gtaagtcttgagaaccaacctgcctgcccatcaccacagcaccccttggagaagttcaag
accactgaccccacagatggatgacaaacaagaattgagttttgccctgcaccctccttt
atccaggaggaggactgagaggccacgttggggcttctagagatagcaaaaaaccttata

 1.08 Intr +  23532  23633  102  2  0  106   85   151 0.992  16.97
actttgctgttagctccaggcatgtgggttaacgcacagaggagagaaatgacgggggaa
atccagccatgcaaatttgttgcagttgactggaatttgttccagtggggccccatacca
cacatgaggaacctcctgactgtgccatcctgcttcccctctctgctcacccttctgcag
ATCAAGAACCTCGGCACCAACCAATGCCTGGATGTGGGTGAGAACAACCGCGGGGGGAAG
CCCCTCATCATGTACTCCTGCCACGGCCTTGGCGGCAACCAG
gtatgcagcccacccatctccggagcatctcctctcctcaccggctccttttctctaccc
taaagagtcctttcctgaggactgggagggaggagataccatccctgccctcaggaagct
tccagtcggaggagaaggcataacacacacaaggtctgaataagggacatccggagagaa

 1.09 Intr +  25024  25176  153  0  0   91  109   183 0.999  20.97
tccagcataaccctgatatggtaacaatcctgaaggcagcacataaatgagtaaagtctt
ggcatggcctcacattcactctcctccccaggagaccatgcatggtagacagctcagggc
aggtggctttggaaggctgggggtgaactctccacctgcttctcttgtcttgatttccag
TACTTTGAGTACACAACTCAGAGGGACCTTCGCCACAACATCGCAAAGCAGCTGTGTCTA
CATGTCAGCAAGGGTGCTCTGGGCCTTGGGAGCTGTCACTTCACTGGCAAGAATAGCCAG
GTCCCCAAGGACGAGGAATGGGAATTGGCCCAG
gtgagtcagtgtccagaaagctcagaatcaagaacttgaggccaggtgtggtggctcacg
cctgtaatcccagcactttgagaggccgaggagggcagatcacgaggtcaggagttcgag
accacctggccaacatggtgaaaccccatctctactaataatacaaaaattagctgggca

 1.10 Term +  26490  26603  114  2  0  133   48    49 0.970   3.97
atagaggtgggaactcaggaatgtgtctcatgagagggcaggaaaggaatggggaagtgt
cctctttgtgccttgtggggttcccttggcttttgtcaattgcaccccatcgcattgtcc
ctggtagcaccgttaagaggtctgtggcccagactgaccttttgctttgtcatcttttag
GATCAGCTCATCAGGAACTCAGGATCTGGTACCTGCCTGACATCCCAGGACAAAAAGCCA
GCCATGGCCCCCTGCAATCCCAGTGACCCCCATCAGTTGTGGCTCTTTGTCTAG
gacccagatcatccccagagagagcccccacaagctcctcaggaaacaggattgctgatg
tctgggaacctgatcaccagcttctctggaggccgtaaagatggatttctaaacccactg
ggtggcaaggcaggaccttcctaatccttgcaacaacattgggcccattttctttccttc

Predicted peptide sequence(s):


>GALNT6_1|GENSCAN_predicted_peptide_1|614_aa
MPLRLAMVGCAFVLFLFLLHRDVSSREEATEKPWLKSLVSRKDHVLDLMLEAMNNLRDSM
PKLQIRAPEAQQTLFSINQSCLPGFYTPAELKPFWERPPQDPNAPGADGKAFQKSKWTPL
ETQEKEEGYKKHCFNAFASDRISLQRSLGPDTRPPECVDQKFRRCPPLATTSVIIVFHNE
AWSTLLRTVYSVLHTTPAILLKEIILVDDASTEEHLKEKLEQYVKQLQVVRVVRQEERKG
LITARLLGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTVVVSPDIVTIDLNTFEF
AKPVQRGRVHSRGNFDWSLTFGWETLPPHEKQRRKDETYPIKSPTFAGGLFSISKSYFEH
IGTYDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTSVIARNQ
VRLAEVWMDSYKKIFYRRNLQAAKMAQEKSFGDISERLQLREQLHCHNFSWYLHNVYPEM
FVPDLTPTFYGAIKNLGTNQCLDVGENNRGGKPLIMYSCHGLGGNQYFEYTTQRDLRHNI
AKQLCLHVSKGALGLGSCHFTGKNSQVPKDEEWELAQDQLIRNSGSGTCLTSQDKKPAMA
PCNPSDPHQLWLFV