GENSCAN 1.0	Date run: 15-Jan-104	Time: 02:24:38

Sequence APOBEC1_1 : 18901 bp : 44.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1231   1246   16  0  1   96   93     3 0.350   1.96
gtccctctcagtcggccccctgtttgtacagacagctcagattcccataactgcctgaga
tgcgggaatgagtcatcctctgcccaagcaggtggcagtgggcacacctgaagcaacaaa
gtccaggaacaatcagcacaacttatgactccagaggaggaagtccagagacagagcacc
ATGACTTCTGAGAAAG
gtaaaatggatccgggggcttggcaagtattcttgaacaatgcaagaatggtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctgctgattcttgca
tctgtgggtgttttcaaacttccctattattgattaatatattagtcttaaataagatgg

 1.02 Intr +  12471  12498   28  1  1   77   94    24 0.690  -0.93
tccttaaaaatcttgcttttcttgggtacaatgagctggtccaatacaattaatccatga
gagaatcttcaaattccattttctgagatgatttggaggtttggaataatagagcacttt
ttcttagcaactcatttgatatttgagtgttgtttgacataatcatatcttggtcaacag
GTCCTTCAACCGGTGACCCCACTCTGAG
gtaagaataacactatcacagtgcccatttaatttgatcaagaatcaatgggtatttaag
agctgtgcatggtggcacatgcgcctataatcccagctactcaggaggctgaggcaggag
taggaggatcgcttgagcccaggaggtcaaggctgcagtgagctatgattgcaccactgc

 1.03 Intr +  14268  14665  398  0  2   89   98   185 0.482  13.82
ggaggttgtggtgagctgagattgcaccactgcactccagtctgggcaacagtgtgagac
tccatcttaaaaaaataaaataaaataaaataaaataaaaaaagaagaggggagcaggaa
aagatttctaagatctctctaaatgtggcatgacagtgtgggctgctttttgtatttcag
GAGAAGAATCGAACCCTGGGAGTTTGACGTCTTCTATGACCCCAGAGAACTTCGTAAAGA
GGCCTGTCTGCTCTACGAAATCAAGTGGGGCATGAGCCGGAAGATCTGGCGAAGCTCAGG
CAAAAACACCACCAATCACGTGGAAGTTAATTTTATAAAAAAATTTACGTCAGAAAGAGA
TTTTCACCCATCCATGAGCTGCTCCATCACCTGGTTCTTGTCCTGGAGTCCCTGCTGGGA
ATGCTCCCAGGCTATTAGAGAGTTTCTGAGTCGGCACCCTGGTGTGACTCTAGTGATCTA
CGTAGCTCGGCTTTTTTGGCACATGGATCAACAAAATCGGCAAGGTCTCAGGGACCTTGT
TAACAGTGGAGTAACTATTCAGATTATGAGAGCATCAG
gtaaaaacagtaaacaaagaaacttcattgtttacaacagactgtggtgatagtagctgt
ttttaggccagaagattggttagcccaggctggaagtctcagaagtaaaagtccaaaata
atgtcataaaggactaggtctgaaattcatgacaaggaaagttacaaaaatacaactcct

 1.04 Intr +  15962  16080  119  0  2   58   94    49 0.113   2.68
ctctagtcttgcctctcagccatctttaaatgaactgctttattctttttagggggtcta
atgtccagcagcaactagactagagactacaggctttctatacgggaagctaggttgggg
atcttcttaagtaatttaccattgtgcttgttgaatgagccaagatttgtgtttccttag
AGTATTATCACTGCTGGAGGAATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGGC
CACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTA
gtaagtcactttagggacacaaatgttgatgcaaaaagaagcatccttcttcaaaggtct
ttcctgagaaaatttgactcatatcttctttttgacatttatattgagatttagttattt
aactagctagctcctcttaagaaaatctcagagccaggtatggtggtgcacacttgtagt

Predicted peptide sequence(s):


>APOBEC1_1|GENSCAN_predicted_peptide_1|187_aa
MTSEKGPSTGDPTLRRRIEPWEFDVFYDPRELRKEACLLYEIKWGMSRKIWRSSGKNTTN
HVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVARLF
WHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNYPPGDEAHWPQYPPLWMMLYAL
ELHCIIL