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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (7366 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       3247       3368   2   Internal    122    60    Marginal
taaatacgaagcctcagccctcataggtcttatattaccatacactatgttaatgtaaga
agaggagaaagagtggtaaagttacttaaagtcacccagctagtaagtgctccatggcca
agcgcagaaacacaccgtgactgggcttgttctccctccttccttgctttccctgagcag
GAAAGAGCCAGTGGCAGTATCATGTTCAGTGAGATGCAGGGACGAGAGGGGGAATGGAGA
GAGGGACTTAGATGACTGCCATAGCCACTATGCCATGTTCCCAGGGACCCCCAGCCCTGG
TG
gtaagtgtggcacagcttggctgattcccatcctgttcccaccccagatccaggactgag
atcccagaaccatgaacctggccatcagcatcgctctcctgctaacaggtacccggcatg
gggcaggactggggctccaggcgccctggcttccttccctccagagaagcagcttctccc

Exon  2 +       3923       4294   1   Internal    372    77        Good
gtccttgaaacacattgataggatccaaggctcaagcagagtggggagggaggctggggt
ctgcaaaggagaagtgggatccctggggtggggaaaggcactcagagagcagaccccggt
cccctccctagccaggcccatctctccacttcaggtgggtgggaggcccctgtgccgcag
GCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGA
AGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATG
AGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGC
ACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACTTCA
CCAGCAAATACAACATGAAGGTCCTCTACTTATCCGCCTTCACTAGCAAGGACGAGGGCA
CCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCA
CAGTGCTCAGAG
gtgagacaagcccctaacaaggtcaagtgagctgggagagccaggctcggggacagcagg
cagttcccttggctggactagagaggagaatagccccataacgctctcaccctctcccaa
ctgctgcctggtcaactggggaaccattgccttcggtgtgaatggggtgaagagctcagg

Exon  3 +       4825       4937   1   Terminal    113    88        Good
agtaatctgcaaatgggaaagatggctggttctgtgagaccgggctgttcctggtcccag
ctaagacattgcagtacccacctcccaaagggagtacacccttgctttgggcctgtgcct
gcctgagtcctgatccgtcttccttcctaccctgcccccggcccccttctctttctgcag
ACAAACTGGTCAAGTGTGAGGGCATCAGCCTGCTGGCTCAGAACACCTCGTGGCTGCTGC
TGCTCCTGCTCTCCCTCTCCCTCCTCCAGGCCACGGATTTCATGTCCCTGTGA
ctggtggggcccatggaggagacaggaagcctcaagttccagtgcagagatcctacttct
ctgagtcagctgaccccctccccccaatccctcaaaccttgaggagaagtggggacccca
cccctcatcaggagttccagtgctgcatgcgattatctacccacgtccacgcggccacct

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