GENSCAN 1.0	Date run: 15-Jan-104	Time: 02:17:59

Sequence DEAF1_1 : 53142 bp : 52.64% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1299   1849  551  2  2   72   25   664 0.352  50.77
gccggcgagaatctgcctagagccgtccagccctgtcggccggggacgacagccgcctca
gcctgtcaggacagtgaggagagcaggggccgagtctctcggaagccctcgtgaggactc
ggacctattcggactgattcggcttcccacttcggggaacttcgaccctcctcggttcag
GACTCGGTCTCGGCTCGGCGGCTTCGTGCAGGTTCGGCTCCTACTCGGGCAGCCTCTGTT
CGCCTCGGCTCCGCTCCGCGGGCGGACTCGGCTCGGCTCTGCTCGGCGGCTGGCTGCCTT
TTCGGTCCCTATTCGGGCGGCGGCTTCGGGCGGCCTCGGCCCAGCTCGGGCGTCCTCTTC
GGGCCCCGCTTCGGGCTCCGCGACCGGCGCTTCGGGCGGTCCCGGACGGCGCCTTCGGGA
AGGCTCGGCGGAGTCCGGATGGAGGACTCGGACTCGGCGGCAAAGCAGCTGGGCCTGGCT
GAGGCGGCGGCGGTGGCGGCCGCGGCCGCTGTGGCGGCGGCGGCCGCGGCCGCGGCAGGA
GGCGAGGCGGAGGAGCCGGTGCTGAGCAGGGACGAGGACTCGGAGGAGGACGCAGACTCG
GAGGCGGAGCGGGAGACGCCGCGGGTCACGGCAGTGGCGGTGATGGCGGCGGAGCCCGGG
CACATGGACATGGGCGCCGAGGCCCTGCCCGGCCCCGACGAGGCCGCCGCTGCCGCAGCC
TTCGCAGGCAA
gtgcgcccgccggcctctcgcctcgtccggttcccgcgcgcctaccccgcgcgcctgccc
cgcacaactgtcccaggtgaccagcccgccacacctgtccctcacacctgctccacgtga
ccagcccgctccacccgccctgcacacctgcccctcacacctgctccacgtgacccgccc

 1.02 Intr +   3000   3115  116  0  2   35   71    36 0.181  -2.81
ccttctcaggctccaaaacactgggagcccgtggcagagctcacagatgccctacggggc
tggtgccgtccacccacctcctgtgtcccgcccttgtgtccgtggggcatagacttcccc
acccactggcttcctaacgcactgtattcttccccattggagttcccgagtgtcccccag
GGACTCACAGCTCAGTGTTGAGACCCTTGGGAGGAGCTTCTTGTTGCGTTGTGAGGCACT
TTTCCCCTACGGAGCTTTGCGGGTTGAGGAACTGGATCCCAGTCCTGGTGTGCTGG
gtatgtcagggcattgcgtgtgctctgggtgcttgttcggcctgggggctgggtgggggc
cagcagcgtctgggctgcccttggtcagctgagtggccctcgaaggcaaaggggtcactg
ctgcttgtttggttggttaagaaaaaaaagtgagggaaggctttgtgactctcaggggtt

 1.03 Intr +   5006   5103   98  0  2   91  107    83 0.924  10.73
tgacttagacaatggaatagaaatgtaggtcgagcgtgttcatggaagtgttaagatctt
cctggttacaagggcacacacctgagggggagtcactttgtttgaagcacctgagcgagg
ctgttcgctttgtccattctggcttttgttgcttgttaaatgaggctccttctgttgcag
AGGTGACCACAGTGACAGTGGCCAACGTGGGGGCTGCTGCAGACAATGTCTTCACCACGT
CTGTGGCGAACGCGGCATCCATCTCAGGACATGTTCTG
gtaagctgctccgaggggcacagcccagggcgggtggtgccacgctgggggcctccggct
tccccgaggctctcccggggttcagcccgctgtgtgaacgtctgctctgtgagctgggga
gggacgcactggctcgctctgctctcagaggccttcgggctgtgctggaggtgggagaaa

 1.04 Intr +   8144   8273  130  1  1  101   92   182 0.999  20.67
cttggctctgttttcaagtctttgagaggtatctttggaaaagatatggggtgcctaggt
gagcgtcccttcttggtgagaacagccagagagccctgctggaggacggcccagctgggc
tcagtgacacgcctggtgtcactctcggacgtgacctgacggagcggtttttccttctag
TCTGGTAGGACGGCCCTTCAGATCGGGGACAGCCTGAACACCGAAAAAGCGACACTGATT
GTCGTCCACACAGATGGGAGCATCGTGGAGACCACCGGGCTGAAAGGCCCGGCAGCTCCC
CTCACCCCAG
gtacagcggtgcctgcaccccaggcctcgggcaaaacacgtttcagaatagctagaattt
atttcagggatttatttacttgtttctttttgtggtaaatttggaatatcatctattaat
agattttaagtaaaagcattggaattttcctgaccaagaagtttttccgccgttgaagga

 1.05 Intr +   8547   8693  147  1  0   84   94   172 0.991  18.12
ggtaaatttggaatatcatctattaatagattttaagtaaaagcattggaattttcctga
ccaagaagtttttccgccgttgaaggaggtggcgctgccggggaggtggtgtctgagatg
agagtgtactatgcttcccggtgtccggcctctcaccttcaaacactttctctgcccaag
GTCCTCAGTCTCCTCCAACCCCTCTGGCTCCCGGCCAAGAAAAAGGTGGAACTAAATACA
ACTGGGACCCTTCTGTGTACGACAGTGAGCTGCCCGTACGGTGCCGGAACATCAGCGGCA
CTCTGTACAAGAACAGGCTCGGCTCAG
gtgaggactgccacttcagactccaaagttgtattcccctttgtaacccccctagcataa
attgggggctgagaaagatgaaaatcatggcacctagaactagttaagaagacagggctg
ggcgcggtggctgatgcctgtaataccagcactttgggaagccgaggcgggtggatcaga

 1.06 Intr +   9607   9746  140  2  2  124   74   160 0.961  18.89
acaggctgcaaaggcagacccgtggtggacctgtcagggccaagtatgtgggtgggtgag
atcacatgagccgctggggcgctggtgctggtggaggggttgaggaggcgccaggaggta
ggcaatggcagaggtgacgttcccacctgccatcatcatgactgctgcccttccttgcag
GCGGCCGGGGACGGTGCATCAAGCAGGGGGAGAACTGGTACAGTCCCACCGAGTTTGAGG
CCATGGCAGGAAGAGCCAGCAGTAAGGACTGGAAAAGAAGCATTCGCTACGCGGGCCGAC
CCTTGCAGTGCCTCATCCAG
gtatcgtccgtgacctcacctgtgctcagcacacagttcagacgtggggccctctgaggc
ggcccagccagagggagggcacagaccacggggtcagacaaatggggtttgcagcctcca
cctgctgtctgtgtggccttgggcgagtgatttaccctctcatgtttcagtttccgggtc

 1.07 Intr +  11641  11706   66  0  0   70   83    52 0.776   2.49
cactgcactccagcctgggcaacccaacaagactctgtctcaaaaaaaaaaaaaaaaaaa
agaatttttatatttatgaatggtaggtaagtggtaaaagtggttgaaatcttctattat
tgaatgattgacatttaggggctgacttgctaatgcatggtggttcttttcacatctcag
GATGGGATCTTAAACCCTCACGCTGCCTCTTGCACCTGTGCTGCCTGCTGCGACGACATG
ACCTTA
gtaagtggccagcgtgtctggaacaggatgacttggtggggctgggggcggctgagtggg
tcccacagcccttggcctctcggctgtttccctcctgccctctgccttggagagagacac
tgtcctcacttctcctgggttgctctgttccctcctccctgatacgtcacagtgaatcct

 1.08 Intr +  15515  15641  127  1  1   93   76    95 0.995   9.56
agagtgaaactccgtctcaaaaaagaaaaagaggtgggatctttaggggcgcttaccatc
ttaatgtggtctcaccatgtgactcacacaccccgcggtgcccccacttaaggaggagtt
gcaagcgcagcatagcttttgcacacatgaaggtggtggcctctctcctttctcccccag
AGTGGCCCAGTCAGGCTTTTTGTGCCTTACAAAAGGCGCAAGAAGGAGAATGAACTGCCC
ACAACTCCCGTGAAGAAGGACTCCCCCAAGAACATCACATTGCTTCCAGCCACCGCGGCT
ACCACCT
gtgagtttgagaaaacacagctctagtttactgaggggacctgagtgcattgccttctct
cgtcaccactcccacggccactgcgggattctcacttctaaagcacattgcgtggccaga
gggattccaacgccatcacactcctttgcagtgcgtcccccgggtgggaaggggtgtccc

 1.09 Intr +  16788  16916  129  1  0   77   99   133 0.996  14.47
ctgtgaggtcttctccaaggtctgggatttcccccgtgtccttcacatgggagggtacag
ttaccactgcccgcccttcagcccaggcccccacaaggattggcgcccgtgggtggcacg
ggacctgtgtgccgtgggcgccactgcctggccgcgtgaaatgtgcttctgcctttccag
TCACCGTGACCCCCTCGGGACAGATCACGACCTCGGGGGCACTGACCTTTGACCGAGCGT
CCACGGTAGAGGCCACTGCTGTCATATCAGAGAGTCCGGCCCAGGGCGACGTCTTCGCAG
GGGCCACAG
gtgagctgctccagtgcctgcctgacgcgtcctcagcatatccctgtctgtgacatcaca
tccccgacgccacattgggctgcataggctgctgggtgcctcgagaggggccttgaacca
ggcgtttgttggtggggacagcgtgtgagccacgtcaggtgggcggtgcagtgtggatgg

 1.10 Intr +  17782  17910  129  2  0   92   82    51 0.982   6.07
tgatatagccccaatcctattatgtcaacgattcaggatcaccacatttcaggggctcag
tagccacgtgtggccataagctactatgtgtactgaatggcgcagccatacagcgtgata
tttagagtctgctgtgcggacaaccatcccgagcctccctgtcctttttctccccaacag
TCCAAGAGGCCAGCGTGCAGCCCCCATGCAGGGCCAGCCACCCTGAGCCTCACTACCCCG
GCTATCAGGACAGCTGCCAGATCGCACCGTTTCCAGAAGCTGCGTTGCCAACGTCACATC
CCAAAATAG
gtaggtttgaaagaattcacacatgtacaggttattgtcctcagaattgcttccaatgaa
agaattcctaagtgaaatgggattcattttggtttggtttgttgtttttgttgatgcatt
agatcagtggctggtaaagtgtggcccactgcctatgtttgtaaataaagttttactgac

 1.11 Intr +  21348  21595  248  1  2   29   76   388 0.158  29.41
tcactgttagccaggatggtctcgatctcctgacctcatgatccgcctgccttggcctcc
caaagtgctgggattacaggcgtgagccaccgcgcccggctgagaatttttaacggaggc
cattttgaagctaggagatgtattaatttcttggtttgttttgctttccaaatgctctag
TGTTGACATCCCTGCCTGCGCTGGCGGTCCCACCCCCGACTCCCACCAAAACGGCACCTC
CCGCGTTGGTCAATGGGCTGGAGCTGTCAGAGCCGCGGAGCTGGCTGTACCTAGAAGAGA
TGGTCAACTCCTTGCTCAACACAGCGCAGCAGCTGAAGACGCTGTTTGAGCAAGCCAAGC
ATGCCAGCACCTACCGAGAAGCTGCCACAAACCAGGCCAAGATCCACGCTGACGCAGAGC
GGAAGGAG
gtaaccttggaacaaatgggaagacacgacctgtgctgagtaaccccaggccaccctggt
gcctgtgcccagctgcgtaagacccaccttggctcacaaggcccctgccccacctttctg
gaaaagggagctgtggagagtcatttacaaatgaagcttttcctaaagaaaagtgacagc

 1.12 Intr +  33278  33588  311  1  2   81   85    78 0.000   2.46
caaagtgctgggattacagacgtaagccaccgtgctcaactaggttttgtgttttttata
gagacagcatcttgttttgttgccgaggctggtcctgaacacgtggtctcaagatattcg
cccagtcagcctcccagagtgctgggactctaggcgtgagcccctgcttctggcccccag
GCCAGTAGTAAAAAGCCAAATATCATCCCTTTCAGAGCATCAGGACAGCGGTTGTGCTCA
GGGAGGCTGGGAATGGGCATCGTGCCCTCTGGGGGTGCGGCAGGGTCAGTTGGCTGGAGG
ATATTCATGGTGCTGCTGCCCCCTGCTGCCGTGCTGAGGGCTGACATGGTGAACAGTCAT
GGGCACTTGCAGACGTGGTTGTGCCCAGTGCTGTGTGCATGCAGCCGTTCCAGCAAAGGT
GGTGGTCACTTGGACCATTGTGGTGCCATCATGGTACAGCACCCAGGCAGGAGCAAGGCC
GTTGTGTTCTG
gtgagatgatggttctgaattagatgtggagatttctttgagatcagctccacaggtatc
ttacgagggctcgggggtgaggctcagaagtcctacaaggaggggcctcaacctgtgtcc
cttcacctgcagcaacagcaacgcggagcaacctccaggagcctggggggcgcctgggct

 1.13 Intr +  39558  39709  152  0  2   66   37    87 0.000   1.72
accccaaagctccttctaaccttcctagaacgttatttttcagtttaaaaaaaaaaaaaa
gttttgcaaagggcataccgtgaaaggcccaagtggttgaaagtcccagctgaggctgaa
gaggcgcctgcgaggcaacaggacaggcttcccgttcagttcaggggtgctgtcctccag
GAACTATGCTGGGGGGCAAGTACAGGACGTCCTGGTGTGTGGTGCACAGGGACTGCTGGA
CACGGAGACCCGTGCCCTTCTCAGCGTGGGGGCCGCTCCCCGGGACAGTGACCACGCTCC
CGCCAGCCTCCCACCCCACCTGACCTCTGTCT
gtgaggggctggaccagggtcctgcctggcccggccatccacagagcaacccagaatgtt
aataaagcctacagaagctgtgttctccttcgagaagcttctctgtggttacagactttt
taagaaatattttgtcggctgggcttggtggctcatgcctgtaatcccagcattttggga

 1.14 Intr +  42199  42338  140  2  2   95  100   156 0.086  18.19
caggagaattgcttgaacccaggaggcggaagttgcagtgagctgagatcgcgccacggc
actccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaagggg
gtccaatggggggaacttggggcctcctgcctgcacctgcctctgtccccggtgtctcag
GGGCTCTCCATGGCCACGTCACTGACTGGCCTGTTGTGTCCTTCTTGCAGCAGTCCTGCG
TTAACTGCGGCCGGGAGGCTATGAGCGAGTGCACCGGCTGCCACAAGGTCAACTACTGCT
CCACCTTCTGCCAACGCAAG
gtaggtctcacctacaccaggctcagtgcccccgcctcctccctcgctacgaagacccct
gggtggccctccctccccttgtgctcctggtgccacacctgactcccctccctgtccctc
cctctgggaatccggggctcctgcctggctccgtgaagaccctgcagaaggctcacatgt

 1.15 Intr +  51522  51614   93  2  0  138   55   108 0.128  13.16
gaaggctgtattggagcagagcccaccagagtttgggcgcacgggggctggggagggcat
tctcagcacctccaggtgaggttacagagggctgcaccctctggggtctgccttggggac
cctgcccagaccctgctccacccactgaccctgctgacatgggtgtgtcctcccttccag
GACTGGAAGGATCACCAGCACATATGCGGCCAGTCAGCAGCTGTCACCGTCCAGGCAGAC
GAAGTCCACGTGGCTGAAAGCGTGATGGAGAAG
gtgaccgtgtgaggctccatcggccgccctgggagctggggcccctcgcactcctgtgag
gcttttgcaggtcgaaggcccccctgaggactctggggggacgttgagaagaggggtgtg
ggaaggtaaagaaacttgctggacaagtcattaacacactttaagcgaatggtgccctgg

 1.16 Intr +  52017  52387  371  2  2   94   49   185 0.056   9.67
cagattttttatccctgggatcatgagcgtccggtcttgcccacagggcctgtgctgcga
cgcacatacatacgtgttgtgtctgtcaataaagtgtaaataaggtctccctgccccaca
cggccggttgcagtgccagccctcgggggggggtttcctccccttcctcctactgcgcag
GTGGGAAAACCAAGCCCACCGCACCTCCAGTGCACGGGACAGCGCGGCCAGGCCGGAGCC
TCCGGTGCACGGGGCAGCGCGGCCGGGCTGAAGCCCTGGCGTCTGGTGGCTCGTGTAGTC
CAGGAGGTCTTCGTTCCTTCTGTTCCACGAGACCCTCGTGGCTGCTGGGAGGTGCAGCAG
GCCTACGGCCCTTCCCGCCAGGTTTCGGGGCACATGGTGCCTCCTGTGCCCTGGCTGCTT
GAGCAAGCCCGACGGTCCAGCACGGCCTGTTCAGTCCACGTGGACAGCTTGGTGGCCTCG
GTCCAGGGATCCACACGCAGAGCCTCATGGCCTCCTGGTCTCCCCCTTGTTTCTCATGGC
CCTGGCGCCAG
gtggaggagagagaaagggctgaagcctgtggggggcacaagggggcgtgtccagcgtgt
ttgggcactgggctgggcctgaacatgggacccccctgccctcctgaccgagagcgctgc
tggagcagcatcactcttgttctggaagcttctgccctcatggcctgtgttctctgcaca

Predicted peptide sequence(s):


>DEAF1_1|GENSCAN_predicted_peptide_1|983_aa
DSVSARRLRAGSAPTRAASVRLGSAPRADSARLCSAAGCLFGPYSGGGFGRPRPSSGVLF
GPRFGLRDRRFGRSRTAPSGRLGGVRMEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAG
GEAEEPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAA
FAGKDSQLSVETLGRSFLLRCEALFPYGALRVEELDPSPGVLEVTTVTVANVGAAADNVF
TTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGP
QSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNRLGSGGRGRCIKQGENW
YSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPV
RLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRAST
VEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQIAPFPEAALPTS
HPKIVLTSLPALAVPPPTPTKTAPPALVNGLELSEPRSWLYLEEMVNSLLNTAQQLKTLF
EQAKHASTYREAATNQAKIHADAERKEASSKKPNIIPFRASGQRLCSGRLGMGIVPSGGA
AGSVGWRIFMVLLPPAAVLRADMVNSHGHLQTWLCPVLCACSRSSKGGGHLDHCGAIMVQ
HPGRSKAVVFWNYAGGQVQDVLVCGAQGLLDTETRALLSVGAAPRDSDHAPASLPPHLTS
VWALHGHVTDWPVVSFLQQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQS
AAVTVQADEVHVAESVMEKVGKPSPPHLQCTGQRGQAGASGARGSAAGLKPWRLVARVVQ
EVFVPSVPRDPRGCWEVQQAYGPSRQVSGHMVPPVPWLLEQARRSSTACSVHVDSLVASV
QGSTRRASWPPGLPLVSHGPGAX