GENSCAN 1.0 Date run: 15-Jan-104 Time: 02:20:56 Sequence CCND1_1 : 15768 bp : 58.50% C+G : Isochore 4 (57 - 100 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 1410 1607 198 2 0 87 64 380 0.656 34.56 gttgcaaagtcctggagcctccagagggctgtcggcgcagtagcagcgagcagcagagtc cgcacgctccggcgaggggcagaagagcgcgagggagcgcggggcagcagaagcgagagc cgagcgcggacccagccaggacccacagccctccccagctgcccaggaagagccccagcc ATGGAACACCAGCTCCTGTGCTGCGAAGTGGAAACCATCCGCCGCGCGTACCCCGATGCC AACCTCCTCAACGACCGGGTGCTGCGGGCCATGCTGAAGGCGGAGGAGACCTGCGCGCCC TCGGTGTCCTACTTCAAATGTGTGCAGAAGGAGGTCCTGCCGTCCATGCGGAAGATCGTC GCCACCTGGATGCTGGAG gtgcggggcttcgggcggctctcttaagacttccctgcaacttgttgcccagacccacgt ttctttgctactcacccccctcccttctctcccgctagaactttgaagtttgccgtggtg tttctagggatccgtattttcaaaataaaaattgcgggtattttctgaaggaggaagggg 1.02 Intr + 3127 3660 534 0 0 77 32 726 0.293 60.40 gtgggtactggggacgcgcgggggagggggcgcatcacgggaagctcctgccgcccccag ccccgacccctcggcgccctccagacctggcggccctgccaagcgcgatggggggtgcgg gggcgtgcgggggggcggcgcgacctggcggcggcggtcacgggccccgtgcctccgtag GTCTGCGAGGAACAGAAGTGCGAGGAGGAGGTCTTCCCGCTGGCCATGAACTACCTGGAC CGCTTCCTGTCGCTGGAGCCCGTGAAAAAGAGCCGCCTGCAGCTGCTGGGGGCCACTTGC ATGTTCGTGGCCTCTAAGATGAAGGAGACCATCCCCCTGACGGCCGAGAAGCTGTGCATC TACACCGACAACTCCATCCGGCCCGAGGAGCTGCTGGTAACCACTGGACCCCGCCGCCCC CCGCCCCCCGCGAGCCGCACGCAGGACCACGGGGCCGGGGAAGGTGCAGGCGGTGGCGGC CGGCCCGCCTCTGACATATCTGCTCCTCCGAGGGAGGGCGGCCCCGCCGCCGGGCGTCCC TGTCCGGGGAGCGGGCGGGATCCTAGCCGCCCTCGTCCCGCCGCCCTGTGTGCGCTTGCC TGCGACTCCCACCGCGTTCGCGCCCCGCGGTGTGGCCGAAAAGTGGGCGGCGCGCGCCCT CCAGCGGCTGCACGAGGAGCGCCGCGCTCGGCGCTGAGCCTCCAGTTCCAGGTG gtgggaggtctttttgtttccacttgcagagtcttttcacgcggcgggcgccttttctgt tttgatctgggattgcgtgttgccccagctcccttgagtccccagcattcgccagccctc ccctccaacatccaggaccgcacgagacgcaggggccagtgctctgagccggaggtgcgg 1.03 Intr + 3928 4087 160 0 1 82 91 273 0.990 27.75 gctcccttgagtccccagcattcgccagccctcccctccaacatccaggaccgcacgaga cgcaggggccagtgctctgagccggaggtgcggcgtggcccggcccccgtgctgccggct tccccgcgcccccgggctggcccgcacctcccctgatggccgctcaccctgtgttcgcag CAAATGGAGCTGCTCCTGGTGAACAAGCTCAAGTGGAACCTGGCCGCAATGACCCCGCAC GATTTCATTGAACACTTCCTCTCCAAAATGCCAGAGGCGGAGGAGAACAAACAGATCATC CGCAAACACGCGCAGACCTTCGTTGCCCTCTGTGCCACAG gtagggcaggcccggcagcccccggcctccccttgagagccggctccttaggtgaccctg gccggcttcttgctctccacctgggtgctgtctgggaagatgtccccagaccccctcctg cgctggagagcgctcttccagctctggtgagcagaggccctggattgtttgtcgcgctgg 1.04 Intr + 8090 8238 149 0 2 121 131 184 0.994 27.14 tccgagtgcccagggatggctggaggctgaggagggcctggatgtggagcctcagatacc gagtgcttcccttcaggccgggccgcttgctcagagccagcacacagggatgcccggatc acgggggccctgagagggtcccctgctcacagcctccttccctctctccttctgcctcag ATGTGAAGTTCATTTCCAATCCGCCCTCCATGGTGGCAGCGGGGAGCGTGGTGGCCGCAG TGCAAGGCCTGAACCTGAGGAGCCCCAACAACTTCCTGTCCTACTACCGCCTCACACGCT TCCTCTCCAGAGTGATCAAGTGTGACCCG gtaagtgagggtgatgtcccaggcagccttgccggggcttacagggggagacacctagtg ccacggaaatgccgaggctggtgccaaggcccccaagggtgacaaggttggggctggggc tgggcccctcggaccccaggccacagactgacagggcaccggcttcttccactgctccta 1.05 Term + 11214 11378 165 2 0 132 55 370 0.999 36.97 tgatggcagctcccacatctcgctcaggttcagaggaggcagcatgggccgagggacagt ttttggcttagtcttgctcttataaaggcttccgggtcatggcacctgggaaggggccct cgctgcaggccccttctaaggaccccctcttcccacctctccccaccctctctctctcag GACTGCCTCCGGGCCTGCCAGGAGCAGATCGAAGCCCTGCTGGAGTCAAGCCTGCGCCAG GCCCAGCAGAACATGGACCCCAAGGCCGCCGAGGAGGAGGAAGAGGAGGAGGAGGAGGTG GACCTGGCTTGCACACCCACCGACGTGCGGGACGTGGACATCTGA gggcgccaggcaggcgggcgccaccgccacccgcagcgagggcggagccggccccaggtg ctcccctgacagtccctcctctccggagcattttgataccagaagggaaagcttcattct ccttgttgttggttgttttttcctttgctctttcccccttccatctctgacttaagcaaa 2.03 PlyA - 11676 11671 6 -3.44 2.02 Term - 12201 11965 237 0 0 50 39 174 0.837 5.86 2.01 Intr - 14373 14254 120 0 0 42 99 31 0.219 1.46 Predicted peptide sequence(s): >CCND1_1|GENSCAN_predicted_peptide_1|401_aa MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT AEKLCIYTDNSIRPEELLVTTGPRRPPPPASRTQDHGAGEGAGGGGRPASDISAPPREGG PAAGRPCPGSGRDPSRPRPAALCALACDSHRVRAPRCGRKVGGARPPAAARGAPRSALSL QFQVQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVK FISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEAL LESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI >CCND1_1|GENSCAN_predicted_peptide_2|118_aa PLASRYTQHPGLVPLPHHDRQSVPQGPRVVQTDAAARMVERIVGVGQVAFPDPATLAGAR QTSTGWFVTGWFVGVVVTGAKDMHTGTLRYCNQEVTSAMNKVKRLHIYLRNIITYNDL