GENSCAN 1.0	Date run: 14-Jan-104	Time: 22:00:04

Sequence PTEN_1 : 105336 bp : 36.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    727    876  150  1  0   22   91   132 0.523   5.26
gggaagcgagaggtggggcgctgcaagggagccggatgaggtgatacacgctggcgacac
aatagcaggttgctctttgtgctaagactgacaccatgaggacacagatttgggggaagg
gggaatctctaggcaaaggctgttacagtcaaatctctgcgaacgattgtgatccgacag
CGGTGCAAAAGGAAAGAGCGAATGCAGTCCACGCCGCGGAAATCTAGGGGTAGAGGCAAG
GGGGGAGGGTATTCCCCTTGCAGGGACCGTCCCTGCATTTCCCTCTACACTGAGCAGCGT
GGTCACCTGGTCCTTTTCACCTGTGCACAG
gtaacctcagactcgagtcagtgacactgctcaacgcacccatctcagctttcatcatca
gtcctccacccccgccccacaacagcctaccctgcctccggctgggtttctgggcagagg
ccgaggcttagctcgttatcctcgcctcgcgttgctgcaaaagccgcagcaagtgcagct

 1.02 Term +   1512   2373  862  0  1   10   42   553 0.456  34.11
actctttatgcgctgcggcaggatacgcgctcggcgctgggacgcgactgcgctcagttc
tctcctctcggaagctgcagccatgatggaagtttgagagttgagccgctgtgaggcgag
gccgggctcaggcgagggagatgagagacggcggcggccgcggcccggagcccctctcag
CGCCTGTGAGCAGCCGCGGGGGCAGCGCCCTCGGGGAGCCGGCCGGCCTGCGGCGGCGGC
AGCGGCGGCGTTTCTCGCCTCCTCTTCGTCTTTTCTAACCGTGCAGCCTCTTCCTCGGCT
TCTCCTGAAAGGGAAGGTGGAAGCCGTGGGCTCGGGCGGGAGCCGGCTGAGGCGCGGCGG
CGGCGGCGGCACCTCCCGCTCCTGGAGCGGGGGGGAGAAGCGGCGGCGGCGGCGGCCGCG
GCGGCTGCAGCTCCAGGGAGGGGGTCTGAGTCGCCTGTCACCATTTCCAGGGCTGGGAAC
GCCGGAGAGTTGGTCTCTCCCCTTCTACTGCCTCCAACACGGCGGCGGCGGCGGCTGGCA
CATCCAGGGACCCGGGCCGGTTTTAAACCTCCCGTGCGCCGCCGCCGCACCCCCCGTGGC
CCGGGCTCCGGAGGCCGCCGGCGGAGGCAGCCGTTCGGAGGATTATTCGTCTTCTCCCCA
TTCCGCTGCCGCCGCTGCCAGGCCTCTGGCTGCTGAGGAGAAGCAGGCCCAGTCGCTGCA
ACCATCCAGCAGCCGCCGCAGCAGCCATTACCCGGCTGCGGTCCAGAGCCAAGCGGCGGC
AGAGCGAGGGGCATCAGCTACCGCCAAGTCCAGAGCCATTTCCATCCTGCAGAAGAAGCC
CCGCCACCAGCAGCTTCTGCCATCTCTCTCCTCCTTTTTCTTCAGCCACAGGCTCCCAGA
CATGACAGCCATCATCAAAGAGATCGTTAGCAGAAACAAAAGGAGATATCAAGAGGATGG
ATTCGACTTAGACTTGACCTGTATCCATTTCTGCGGCTGCTCCTCTTTACCTTTCTGTCA
CTCTCTTAGAACGTGGGAGTAG
acggatgcgaaaatgtccgtagtttgggtgactataacatttaaccctggtcaggttgct
aggtcatatattttgtgtttcctttctgtgtattcaacctagggtgtgtttggctagacg
gaactcttgcctggttgcaagtgtcaagccaccgattgctttcttaggctatctatatgg

 2.02 PlyA -   3962   3957    6                               1.05
 2.01 Sngl -  37846  36905  942  1  0   42   47   411 0.979  28.67
 2.00 Prom -  39300  39261   40                              -6.15

 3.02 PlyA -  39396  39391    6                               1.05
 3.01 Sngl -  40722  40087  636  0  0   88   44   504 0.895  41.93
 3.00 Prom -  42266  42227   40                              -7.65

 4.01 Init +  53107  53229  123  0  0   56   76    80 0.059   2.59
attacaggtgtgagccactgcacccagctcttagacaaattttttattccaaactttttt
tattttatcatttgaaaggtatatgtttattattttgtcaaaaataattttaaaacgtat
tcttgaagcttatttagatctgtttcataggaactgtgaagaaagtaaagaatttaaaaa
ATGAAGACAGATTTTCTCACCCTGCTTATGGGTGCTTCTCGTGCTAGCCTTTTGCAAGTG
TCGGGAAGTGTAACCTGCAGGAGGCATCAGGGCTTTGGGCCTGCATGGTCTGAGTGCTGC
CCT
gtgagtttcagaaggcgcagcaacctgtatacctgaaagccatctctgctggggcaggta
cctagtgtccccacctacctgggtcgtagtcaggccctgggcaagcctgctatgcttttc
cttccctaatccctcaggggtgggatagagagcacagtggcctcccagggaggtagaagc

 4.02 Intr +  70814  71014  201  1  0   34  115   155 0.253  11.36
caatacattatttttctctggaatccagtgtttcttttaaatacctgttaagtttgtatg
caacatttctaaagttacctacttgttaattaaaaattcaagagtttttttttcttattc
tgaggttatctttttaccacagttgcacaatatccttttgaagaccataacccaccacag
CTAGAACTTATCAAACCCTTTTGTGAAGATCTTGACCAATGGCTAAGTGAAGATGACAAT
CATGTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCA
TATTTATTACATCGGGGCAAATTTTTAAAGGCACAAGAGGCCCTAGATTTCTATGGGGAA
GTAAGGACCAGAGACAAAAAG
gtaagttattttttgatgtttttcctttcctcttcctggatctgagaatttattggaaaa
cagattttgggtttctttttttccttcagttttattgaggtgtaattgacaagtaaaaat
tatatataaatacaatgtataatatgatgttttgatgtatgtgtatatacattgtgaaat

 4.03 Intr +  83387  83687  301  1  1   10  110   299 0.300  19.68
ggaagtttcagaatgattgcagaaagatcagccaggctcttcctgttctccatcgtggtg
caggatcaaggtgaaaaggataaccccatgcaggaattttgcatctgcaggctccgcttc
aacatctgtttaggagaaagtggagacagactgacctgagtaactaaggtcttggaacag
CTTACAGGTCAGAACCAGGTGTTTTCCAAAGCTAGATATACTGTTAGCGCCTTTGGCAAC
AGAAGAAATGAAAAGACTGTTGTCTGCTGCACAGTTCGAGGGGCCAAGGCAGACGAAATC
CTGGAGAATGATCTAAAGGTGCAGGAGTGTGAGTTAAGAAAAAATAACTTCTCAGATACT
GGAAACTTTGGTTTTGGGACCCAGGAACACATTGATCTGGGTATCAGATATGACCCAAGC
ATTGATGTCTACAGCCTGGACTTCTATGTGGTGCTGGAAAAGCCAGGTTTCATCATTGCA
G
gtaagaagtgcgggacaggcttcattggtgccaaatagaatcagcaaagaggaggccatg
cgctggttccagcagaagtatgatgggatcatccttcctggcaaataaattctcatttct
acccaaaagggtaataaaaagttttcagtgaaatgtttaaaaaaaaaataaaaaaaagat

 4.04 Intr +  95616  95782  167  1  2   45   76    76 0.777   0.86
cttacattgtttatatttttatttcatttatttcagttgatttgcttgagatcaagattg
cagatacagaatccatatttcgtgtatattgctgatattaatcattaaaatcgtttttga
cagtttgacagttaaaggcatttcctgtgaaataatactggtatgtatttaaccatgcag
ATCCTCAGTTTGTGGTCTGCCAGCTAAAGGTGAAGATATATTCCTCCAATTCAGGACCCA
CACGACGGGAAGACAAGTTCATGTACTTTGAGTTCCCTCAGCCGTTACCTGTGTGTGGTG
ATATCAAAGTAGAGTTCTTCCACAAACAGAACAAGATGCTAAAAAAG
gtttgtactttactttcattgggagaaatatccaaaataaggacagattaaaagctatat
tttattttatgacatgtaaggaactataatttgttttctattagatctgcaggtgttttg
cttactctggcattggtgagacattataagggtaaataatcctgtttgaaggaaaaggcc

 4.05 Intr +  98657  98881  225  1  0  125   86   116 0.978  12.36
agattgccttataatagtctttgtgtttacctttattcagaatatcaaatgatagtttat
tttgttgactttttgcaaatgtttaacataggtgacagattttcttttttaaaaaaataa
aacatcattaattaaatatgtcatttcatttctttttcttttctttttttttttttttag
GACAAAATGTTTCACTTTTGGGTAAATACATTCTTCATACCAGGACCAGAGGAAACCTCA
GAAAAAGTAGAAAATGGAAGTCTATGTGATCAAGAAATCGATAGCATTTGCAGTATAGAG
CGTGCAGATAATGACAAGGAATATCTAGTACTTACTTTAACAAAAAATGATCTTGACAAA
GCAAATAAAGACAAAGCCAACCGATACTTTTCTCCAAATTTTAAG
gtcagttaaattaaacattttgtgggggttgttgacttgtatgtatgtgatgtgtgttta
attctaggagtacagctgatgaagaacttgcttgacaagtttttaacttatgtattattt
cgaagcagtgtttacgtagcagtaacatgaaagtttctaataaaatacccaatgtacaca

 4.06 Term + 103050 103235  186  2  0  100   38   206 0.999  13.31
tgaacatcttaagaagagggtcatttaaaaggcctcttaaagatcatgtttgttacagtg
cttaaaaattaatatgttcatctgcaaaatggaataaaaaatctgttaaaaatatatttc
actaaatagtttaagatgagtcatatttgtgggttttcattttaaattttctttctctag
GTGAAGCTGTACTTCACAAAAACAGTAGAGGAGCCGTCAAATCCAGAGGCTAGCAGTTCA
ACTTCTGTAACACCAGATGTTAGTGACAATGAACCTGATCATTATAGATATTCTGACACC
ACTGACTCTGATCCAGAGAATGAACCTTTTGATGAAGATCAGCATACACAAATTACAAAA
GTCTGA
atttttttttatcaagagggataaaacaccatgaaaataaacttgaataaactgaaaatg
gacctttttttttttaatggcaataggacattgtgtcagattaccagttataggaacaat
tctcttttcctgaccaatcttgttttaccctatacatccacagggttttgacacttgttg

Predicted peptide sequence(s):


>PTEN_1|GENSCAN_predicted_peptide_1|337_aa
XGAKGKSECSPRRGNLGVEARGEGIPLAGTVPAFPSTLSSVVTWSFSPVHSACEQPRGQR
PRGAGRPAAAAAAAFLASSSSFLTVQPLPRLLLKGKVEAVGSGGSRLRRGGGGGTSRSWS
GGEKRRRRRPRRLQLQGGGLSRLSPFPGLGTPESWSLPFYCLQHGGGGGWHIQGPGPVLN
LPCAAAAPPVARAPEAAGGGSRSEDYSSSPHSAAAAARPLAAEEKQAQSLQPSSSRRSSH
YPAAVQSQAAAERGASATAKSRAISILQKKPRHQQLLPSLSSFFFSHRLPDMTAIIKEIV
SRNKRRYQEDGFDLDLTCIHFCGCSSLPFCHSLRTWE

>PTEN_1|GENSCAN_predicted_peptide_2|313_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTASIILNGQKLEAFPLK
TGTRQGRPLSPLLFNTVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLESPTVS
AQNLLQLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPLTTATKRIKYLGIQLT
RDVKDLFKNYKPLLNEIKDDTNKWKNIPCSWVGRINIVKMATLPKVIYRNNAIPIKLPIN
FFTELEKTTLKFIWSQKRARTAKTILSRKKKAGGITLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEIT

>PTEN_1|GENSCAN_predicted_peptide_3|211_aa
MGRKQSRKAENSKTQSASSPPKDHSSSPAMEQSWMKNDFDELTEVGFRRSVVTNFSELKE
DVQTHRKEAKNLEKRLDKWLTRINSVQKTINDLMELKIMARELHDACTSFSSRFDQVEER
VSVIADQMNEMKQEEKFREKTVKRNEQSLQEIWDYVKRPNLRLIGVLDSDGENGTKLENT
LQDIIQENFPNIARHANIQIQGIQRPPQRYS

>PTEN_1|GENSCAN_predicted_peptide_4|400_aa
MKTDFLTLLMGASRASLLQVSGSVTCRRHQGFGPAWSECCPLELIKPFCEDLDQWLSEDD
NHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKLTGQNQVFSKAR
YTVSAFGNRRNEKTVVCCTVRGAKADEILENDLKVQECELRKNNFSDTGNFGFGTQEHID
LGIRYDPSIDVYSLDFYVVLEKPGFIIADPQFVVCQLKVKIYSSNSGPTRREDKFMYFEF
PQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSI
CSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFKVKLYFTKTVEEPSNPEASSST
SVTPDVSDNEPDHYRYSDTTDSDPENEPFDEDQHTQITKV