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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (9095 bp)
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PERCEVAL Exon Candidates (4 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       2796       2840   0    Initial     45    77        Good
gacctgccagcctatgtgtgcctagtggcttcagggcagaacttggataagcacatgtct
agttcagctctttgttttcctgggtttgggctccccagacgtggcacattagaacctccc
atttctccactcttctgggtcaaattctgactcgcaggttgtaggctagagagaactgcg
ATGGAGAAGGAGGAGGTGCAGGGCGTGTGGGTGTGGACGGGCAAG
gtggggaagagcaggtggacagatggcaagacgagcggccttaagtttgaggggcagaaa
gacccctgcttcacccccactgcaccttagcaaggctgccggtttgcaatagtctcaact
tgcccattggagagtgctcgagattggcccggggagaccctcggagcattttcccagggc

Exon  2 +       5251       5409   0   Internal    159    84        Good
aacaaagacctgctctccatggcccctgaaggctcctacagatctaaggttcatcatcac
cttctagaagatccctatctctgctgtgcttatcttgccttgggtggcatgtgggttgtt
ccttcagggggtcagggtgggcagaggccttggctcagcagtgacccagaccttccccag
GATGCTGAGAGCTGTTACCTTGTCCACACCCTGCTGGAGTTCTACTTGAAAACTGTTTTC
AAAAACTACCACAATAGAACAGTTGAAGTCAGGACTCTGAAGTCATTCTCTACTCTGGCC
AACAACTTTGTTCTCATCGTGTCACAACTGCAACCCAGT
gtgagtagcacacgctctggatactggcagctctgggttcaagtctaggtctgcttccaa
tctgctgggtgaccctctgcaaagtcctccacctccctgggcttcagtttgttatctgta
aaatggggatgatcactcctgcctggcaggattgctgcgagaattaaaggaggtagcccc

Exon  3 +       6733       6816   0   Terminal     84    92   Excellent
aagcagataaacacatgtagatggaggaaaagtgacaggcaggtgggttcatcagtgggc
tcatcccaaaggtgacccatcccttggattggagtcaggtctattttaggcatggcaggt
tggaagaaagactattctcatagctaacatggctgaccttcaaccctcttttccctttag
TTGGACGTAGAAGCAGCTCTGACCAAAGCCCTTGGGGAAGTGGACATTCTTCTGACCTGG
ATGCAGAAATTCTACAAGCTCTGA
atgtctagaccaggacctccctccccctggcactggtttgttccctgtgtcatttcaaac
agtctcccttcctatgctgttcactggacacttcacgcccttggccatgggtcccattct
tggcccaggattattgtcaaagaagtcattctttaagcagcgccagtgacagtcagggaa

Exon  4 +       8434       8587   0   Internal    154    71        Good
ggatcagggcaaaggcgtttccaggagtgtttttataccagacccctgcttagtccatgg
ggctgaggcatgtcacataactcagagcaagagccttctatttgtgtaagacccaaccct
gggaaggatgcccgagacaatagctatgcctctgccccagcctgatgccatgtgatctag
AGCCTGGGCAGCAACAACCCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCAC
AGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCT
ACAGCTTACCTGTCAACTACAGGGGGCTGCCAAG
gtgtgcaagacgacctgggggcagagccatgctcagggcacagatagatggggatgggag
tcgagatggggcatgggaagtgatgagggctctgagaacacatgaagcaggtattggaca
tcagcagatagatgagactccttggcaccacagtccgagcctggggttgggggatagctg

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