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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (8372 bp)
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PERCEVAL Exon Candidates (4 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       5743       5910   0    Initial    168   100   Excellent
gtctccttcaaggcactttcttagacacccaggcaccaggcagatgcaccccccaacaca
cccaccccaagcaagtcacaaatcagcctgctccaactgtcttatggggagggtgtgaga
gaggtgcccaaaggcccctaaaaggtgagcctctcctctctccccacaggggtgaatgtg
ATGCTGAGGAAGATTGCTGTGGCTGCAGCGTCCAAGCCAGCAGTGGAGATCAAACAGGAG
GGAGACACTTTCTACATCAAAACCTCCACCACCGTGCGCACCACAGAGATTAACTTCAAG
GTTGGGGAGGAGTTTGAGGAGCAGACTGTGGATGGGAGGCCCTGTAAG
gtgagtgccagaaggggctccagggtcatggcgtcattgccctgcctctcaacctgccat
tttccaggctagcagttaactcctagcttctctctgtcccagtagggaaaatccctaggt
ggtggtgggggctagaaaggggctctctcccttatccctctcactgcattgcccctgcta

Exon  2 +       6126       6242   0   Internal    117   100   Excellent
attgccctgcctctcaacctgccattttccaggctagcagttaactcctagcttctctct
gtcccagtagggaaaatccctaggtggtggtgggggctagaaaggggctctctcccttat
ccctctcactgcattgcccctgctatgggcccagctcacttggccacctgtctcttgcag
AGCCTGGTGAAATGGGAGAGTGAGAATAAAATGGTCTGTGAGCAGAAGCTCCTGAAGGGA
GAGGGCCCCAAGACCTCGTGGACCAGAGAACTGACCAACGATGGGGAACTGATCCTG
gtaagtcctgcctcctccccactaatagcaaacccagtgctaccttccaagattctctgg
gagaccccagggtgcaggagactcaagaacaaccatggctggactccgcaccctgctgat
gggactgcttgaacagaactaaggtgtccctatcccatacagtgccctgtgtgaattaga

Exon  3 +       6708       6754   0   Internal     47    80        Good
attgctatcctccctccattgatgcctgggcattctgggaccagctcctgcctgttggtc
ttgagccaagaagcaggtttggacctggaggccaagcagagtacctccattcaaccctcc
tctccaaagccacaggaccccaggggcctctcaggctaacaactacttctgtccttccag
ACCATGACGGCGGATGACGTTGTGTGCACCAGGGTCTACGTCCGAGA
gtgagtggccacaggtagaaccgcggccgaagcccaccactggccatgctcaccgccctg
cttcactgccccctccgtcccaccccctccttctaggatagcgctccccttaccccagtc
acttctgggggtcactgggatgcctcttgcagggtcttgctttctttgacctcttctctc

Exon  4 +       7555       7658   2   Internal    104    97   Excellent
cttctccaaggtccttccttggtgtcctgctctggcttccaaggtcacaagggcctcctc
ctcctgacctctcagctggggcactgggctctgaggagctgactcccaccttctcccatg
ttttccatcatggtgacagtttcctcctcctcctccagctgttgcttccctctcctccag
CTTCAGCCCATGGGTGACCCCAGGCCTGGCCTTGGCCTCCCACATGGTTCCAGATGAGCT
CAACGGCACCCACAAGCTGGCCTTGCAGCTGCCTGGGCCTCTGG
gtgagaggtctcatcctgcctgtcagccctttgtgtctgagacaagccatctctgctacc
atccttcctccctgcctcaatctcccacatgcccttctgcctctggcttctaaatcttcc
aggtcccttggatcctcctccaaccctctccctgagcctccacactcaggtctacaccag

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