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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (7404 bp)
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PERCEVAL Exon Candidates (4 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1192       1400   2   Internal    209    98   Excellent
tatgcagacccccgcgactttgaaaattgcttgtgaataatatctaaattcggaattgct
tctcagccttttgactgaaatctccagtgtaatctctaaattctgatcttttggtgaccc
cgggcctagtgccaaaccacccagggctggcttgatgactttctctgttcttctttgcag
CACGTCCACGGACGCCATGCTGGGGACTCTGACACCCCTGTCTTCGCTGCTGCTGCTGCT
ACTGGTGCTGGTGCTGGGGTGTGGGCCGCGGGCGTCCTCTGGTGGCGGGGCCGGTGGGGC
GGCGGGCTATGCCCCAGTGAAGTACATCCAGCCCATGCAGAAAGGACCTGTGGGACCGCC
CTTCCGTGAGGGCAAAGGCCAGTACCTGG
gtgagagcctcctcaccccacagtgcctcaaatcgctcccagcccccaaatcccctgcct
ccctgagagccatcagatcctcaggcgccctccacagctcctcattccccaccaattttc
ctaccttcagtgtttttcctaataccccagagggcctggaaacggtgcagttagctggca

Exon  2 +       2494       2523   0    Initial     30    60    Marginal
ggcccccaggattccagggggaaccagggccccagggggagcctgggcccccaggtgatc
gaggcctcaagggggataatggagtgggccagcccgggctgcctggggccccagggcagg
ggggtgcccccggcccccccggcctccctggtccagctggcttaggcaaacctggtttgg
ATGGGCTTCCTGGGGCCCCAGGAGACAAGG
gtgagtctgggcctcctggagttccaggccccaggggggagccaggagctgtgggcccaa
aaggacctcctggagtagacggtgtgggagtcccaggggcagcagggttgccaggaccac
agggcccatcaggggccaaaggggagccagggacccggggcccccctgggctgataggcc

Exon  3 +       2869       3048   0   Internal    180    69    Marginal
ctgggctgataggccccactggctatgggatgccaggactgccaggccccaagggggaca
ggggcccagctggggtcccaggactcttgggggacaggggtgagccaggggaggatgggg
agccaggggagcagggcccacagggtcttgggggtccccctggacttcctgggtctgcag
GGCTTCCTGGCAGACGTGGGCCCCCTGGGCCTAAGGGTGAGGCAGGGCCTGGAGGACCCC
CAGGAGTGCCTGGCATTCGAGGTGACCAGGGGCCTAGTGGCCTGGCTGGGAAACCAGGGG
TCCCAGGTGAGAGGGGACTTCCTGGGGCCCATGGACCCCCTGGACCAACTGGGCCCAAGG

gtgagccgggtttcacgggtcgccctggaggaccaggggtggcaggagccctggggcaga
aaggtgacttggggctccctgggcagcctggcctgaggggtccctcaggaatcccaggac
tccagggtccagctggccctattgggccccaaggcctgccgggcctgaagggggaaccag

Exon  4 +       2869       3881   1   Terminal   1013    72        Good
ctgggctgataggccccactggctatgggatgccaggactgccaggccccaagggggaca
ggggcccagctggggtcccaggactcttgggggacaggggtgagccaggggaggatgggg
agccaggggagcagggcccacagggtcttgggggtccccctggacttcctgggtctgcag
GGCTTCCTGGCAGACGTGGGCCCCCTGGGCCTAAGGGTGAGGCAGGGCCTGGAGGACCCC
CAGGAGTGCCTGGCATTCGAGGTGACCAGGGGCCTAGTGGCCTGGCTGGGAAACCAGGGG
TCCCAGGTGAGAGGGGACTTCCTGGGGCCCATGGACCCCCTGGACCAACTGGGCCCAAGG
GTGAGCCGGGTTTCACGGGTCGCCCTGGAGGACCAGGGGTGGCAGGAGCCCTGGGGCAGA
AAGGTGACTTGGGGCTCCCTGGGCAGCCTGGCCTGAGGGGTCCCTCAGGAATCCCAGGAC
TCCAGGGTCCAGCTGGCCCTATTGGGCCCCAAGGCCTGCCGGGCCTGAAGGGGGAACCAG
GCCTGCCAGGGCCCCCTGGAGAGGGGAGAGCAGGGGAACCTGGCACGGCTGGGCCCACGG
GGCCCCCAGGGGTCCCTGGCTCCCCTGGAATCACGGGCCCTCCGGGGCCTCCCGGGCCCC
CGGGACCCCCTGGTGCCCCTGGGGCCTTCGATGAGACTGGCATCGCAGGCTTGCACCTGC
CCAACGGCGGTGTGGAGGGTGCCGTGCTGGGCAAGGGGGGCAAGCCACAGTTTGGGCTGG
GCGAGCTGTCTGCCCATGCCACACCGGCCTTCACTGCGGTGCTCACCTCGCCCTTCCCCG
CCTCGGGCATGCCCGTGAAATTTGACCGGACTCTCTACAATGGCCACAGCGGCTACAACC
CAGCCACTGGCATCTTCACCTGCCCTGTGGGCGGCGTCTACTACTTTGCTTACCATGTGC
ACGTCAAGGGCACCAACGTGTGGGTGGCCCTGTACAAGAACAACGTGCCGGCCACCTATA
CCTACGATGAGTACAAGAAGGGCTACCTGGACCAGGCATCTGGTGGGGCCGTGCTCCAGC
TGCGGCCCAACGACCAGGTCTGGGTGCAGATGCCGTCGGACCAGGCCAACGGCCTCTACT
CCACGGAGTACATCCACTCCTCCTTTTCAGGATTCTTGCTCTGCCCCACATAA
cccgcggggggggtcctgctgccctggcctcctcccctttagtggtagagcgaccttttc
aattacaaagaacctcctggaaaaaaaaacaaaagctgaacagaggcggccgtggccttg
gcccgaggagactaacttgctttctccctgcatgcaggctgagattgtttctggaagggg

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